RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 USP17L15C9J2P7 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L10C9JJH3 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L13C9JLJ4 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L12C9JPN9 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L11C9JVI0 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L21D6R901 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L18D6R9N7 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L22D6RA61 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L17D6RBQ6 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L19D6RCP7 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L20D6RJB6 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 GOLIM4O00461 696 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ATMINO43313 823 aaPredicted RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 ATP9BO43861 1147 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 AGR2O95994 175 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 U2AF1L5P0DN76 240 aaPredicted RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 U2AF1Q01081 240 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDH9-201ENST00000231021 ARID5AQ03989 594 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 USP17L24Q0WX57 530 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 INO80DQ53TQ3 878 aaPredicted RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 RNF34Q969K3 372 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 DCBLD2Q96PD2 775 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TGIF2Q9GZN2 237 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 VTI1BQ9UEU0 232 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 NDUFB9Q9Y6M9 179 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ERICH4A6NGS2 130 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TBX3O15119 743 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TIMM44O43615 452 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ALDH1L1O75891 902 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ECEL1O95672 775 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 RBP3P10745 1247 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 EPB42P16452 691 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ZNF76P36508 570 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 NAA30Q147X3 362 aaPredicted RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 DNAJC21Q5F1R6 531 aaKnown RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 DGKHQ86XP1 1220 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 OTUD6BQ8N6M0 293 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 SPIRE2Q8WWL2 714 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 C8orf48Q96LL4 319 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 NAP1L4Q99733 375 aaKnown RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDH9-201ENST00000231021 SEZ6LQ9BYH1 1024 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TOP2BQ02880 1626 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TOP2AP11388 1531 aaKnown RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 HMGXB3Q12766 1538 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TSPAN6O43657 245 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 KATNA1O75449 491 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 COL9A1P20849 921 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 MMP14P50281 582 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 TTF1Q15361 905 aaPredicted RBP5.2□□□□□ -1.58
CDH9-201ENST00000231021 LILRB2Q8N423 598 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 DNAJC25Q9H1X3 360 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 ZNF408Q9H9D4 720 aa5.2□□□□□ -1.58
CDH9-201ENST00000231021 hCG_1642624A0A1W2PR95 340 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 ATF3P18847 181 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 E2F5Q15329 346 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 PARD3BQ8TEW8 1205 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 PHF12Q96QT6 1004 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 KIAA1024Q9UPX6 916 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 SPG7Q9UQ90 795 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 KIF13AQ9H1H9 1805 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 XRCC5P13010 732 aaKnown RBP5.19□□□□□ -1.58
CDH9-201ENST00000231021 GRM1Q13255 1194 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 CCDC70Q6NSX1 233 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 GTF3C2Q8WUA4 911 aaPredicted RBP5.19□□□□□ -1.58
CDH9-201ENST00000231021 CCDC8Q9H0W5 538 aaPredicted RBP5.19□□□□□ -1.58
CDH9-201ENST00000231021 CASS4Q9NQ75 786 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 ZIM2Q9NZV7 527 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 STK26Q9P289 416 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 LEMD3Q9Y2U8 911 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 PCDHGB3Q9Y5G1 929 aa5.19□□□□□ -1.58
CDH9-201ENST00000231021 ETFBP38117 255 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 ITGAEP38570 1179 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 NLRP6P59044 892 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 ILDR2Q71H61 639 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 TAS1R3Q7RTX0 852 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 SNX21Q969T3 373 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 EMID1Q96A84 441 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 E2F7Q96AV8 911 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 GMLQ99445 158 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 TMX1Q9H3N1 280 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 SNTG2Q9NY99 539 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 RNF123Q5XPI4 1314 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 CENPJQ9HC77 1338 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 CCDC88BA6NC98 1476 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 NUTM2BA6NNL0 878 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 SPDYE16A6NNV3 312 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 NUTM2EB1AL46 878 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 HMGB1P1B2RPK0 211 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 PGRP06401 933 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 CTSHP09668 335 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 PTK7Q13308 1070 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 NUTM2DQ5VT03 806 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 METTL3Q86U44 580 aaKnown RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 NUTM2AQ8IVF1 878 aaPredicted RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 MSL3Q8N5Y2 521 aaKnown RBP5.18□□□□□ -1.58
CDH9-201ENST00000231021 HELQQ8TDG4 1101 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 MS4A3Q96HJ5 214 aa5.18□□□□□ -1.58
CDH9-201ENST00000231021 APBA2Q99767 749 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms