RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
VEGFA-201ENST00000230480 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
VEGFA-201ENST00000230480 SERPINB2P05120 415 aa17.91■□□□□ 0.46
VEGFA-201ENST00000230480 MYL6BP14649 208 aa17.91■□□□□ 0.46
VEGFA-201ENST00000230480 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
VEGFA-201ENST00000230480 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
VEGFA-201ENST00000230480 IL16Q14005 1332 aa17.91■□□□□ 0.46
VEGFA-201ENST00000230480 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
VEGFA-201ENST00000230480 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
VEGFA-201ENST00000230480 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
VEGFA-201ENST00000230480 HOXB7P09629 217 aa17.89■□□□□ 0.45
VEGFA-201ENST00000230480 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
VEGFA-201ENST00000230480 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
VEGFA-201ENST00000230480 CHPF2Q9P2E5 772 aa17.89■□□□□ 0.45
VEGFA-201ENST00000230480 RGL2O15211 777 aa17.88■□□□□ 0.45
VEGFA-201ENST00000230480 DPEP1P16444 411 aa17.88■□□□□ 0.45
VEGFA-201ENST00000230480 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
VEGFA-201ENST00000230480 DDX21Q9NR30 783 aaKnown RBP eCLIP17.88■□□□□ 0.45
VEGFA-201ENST00000230480 MAP3K15Q6ZN16 1313 aa17.88■□□□□ 0.45
VEGFA-201ENST00000230480 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
VEGFA-201ENST00000230480 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
VEGFA-201ENST00000230480 COPS6Q7L5N1 327 aa17.87■□□□□ 0.45
VEGFA-201ENST00000230480 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
VEGFA-201ENST00000230480 CHRNA5P30532 468 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 TGFB2P61812 414 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
VEGFA-201ENST00000230480 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 XAGE3Q8WTP9 111 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 ZBTB3Q9H5J0 574 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 UBN2Q6ZU65 1347 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 COL11A2P13942 1736 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-201ENST00000230480 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
VEGFA-201ENST00000230480 HDGFL1Q5TGJ6 251 aa17.85■□□□□ 0.45
VEGFA-201ENST00000230480 ATP10DQ9P241 1426 aa17.84■□□□□ 0.45
VEGFA-201ENST00000230480 GIGYF2Q6Y7W6 1299 aaKnown RBP17.84■□□□□ 0.45
VEGFA-201ENST00000230480 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
VEGFA-201ENST00000230480 CHD4Q14839 1912 aa17.83■□□□□ 0.44
VEGFA-201ENST00000230480 VAMP4O75379 141 aa17.83■□□□□ 0.44
VEGFA-201ENST00000230480 YY1P25490 414 aa17.83■□□□□ 0.44
VEGFA-201ENST00000230480 ANKRD36CQ5JPF3 1778 aa17.83■□□□□ 0.44
VEGFA-201ENST00000230480 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
VEGFA-201ENST00000230480 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
VEGFA-201ENST00000230480 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
VEGFA-201ENST00000230480 ARFGEF1Q9Y6D6 1849 aa17.82■□□□□ 0.44
VEGFA-201ENST00000230480 TNRC6CQ9HCJ0 1690 aaKnown RBP17.81■□□□□ 0.44
VEGFA-201ENST00000230480 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
VEGFA-201ENST00000230480 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
VEGFA-201ENST00000230480 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
VEGFA-201ENST00000230480 G2E3Q7L622 706 aa17.81■□□□□ 0.44
VEGFA-201ENST00000230480 TRMT2AQ8IZ69 625 aaKnown RBP17.81■□□□□ 0.44
VEGFA-201ENST00000230480 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
VEGFA-201ENST00000230480 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
VEGFA-201ENST00000230480 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-201ENST00000230480 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-201ENST00000230480 ARFGEF2Q9Y6D5 1785 aa17.8■□□□□ 0.44
VEGFA-201ENST00000230480 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 GPTP24298 496 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 GPR162Q16538 588 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
VEGFA-201ENST00000230480 NTSR2O95665 410 aa17.78■□□□□ 0.44
VEGFA-201ENST00000230480 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
VEGFA-201ENST00000230480 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
VEGFA-201ENST00000230480 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
VEGFA-201ENST00000230480 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 TCIRG1Q13488 830 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 PLBD2Q8NHP8 589 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
VEGFA-201ENST00000230480 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
VEGFA-201ENST00000230480 ANKRD13DQ6ZTN6 518 aa17.76■□□□□ 0.43
VEGFA-201ENST00000230480 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
VEGFA-201ENST00000230480 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
VEGFA-201ENST00000230480 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-201ENST00000230480 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
VEGFA-201ENST00000230480 SRGNP10124 158 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 PRELPP51888 382 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 LAMB2P55268 1798 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 ADCY9O60503 1353 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 SBF1O95248 1867 aa17.75■□□□□ 0.43
VEGFA-201ENST00000230480 IBTKQ9P2D0 1353 aaPredicted RBP17.75■□□□□ 0.43
VEGFA-201ENST00000230480 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
VEGFA-201ENST00000230480 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
VEGFA-201ENST00000230480 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
VEGFA-201ENST00000230480 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
VEGFA-201ENST00000230480 BCS1LQ9Y276 419 aa17.74■□□□□ 0.43
VEGFA-201ENST00000230480 SLC10A5Q5PT55 438 aa17.73■□□□□ 0.43
VEGFA-201ENST00000230480 C7orf43Q8WVR3 580 aa17.73■□□□□ 0.43
VEGFA-201ENST00000230480 COL4A1P02462 1669 aa17.73■□□□□ 0.43
VEGFA-201ENST00000230480 TAF1P21675 1872 aa17.73■□□□□ 0.43
VEGFA-201ENST00000230480 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms