RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
NDFIP2-201ENST00000218652 CCDC175P0C221 793 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 STX1AQ16623 288 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 ZNF287Q9HBT7 754 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 MCM3P25205 808 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 NECAB1Q8N987 351 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
NDFIP2-201ENST00000218652 UBA7P41226 1012 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 NOP2P46087 812 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 ZNF444Q8N0Y2 327 aaPredicted RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 DBF4Q9UBU7 674 aaPredicted RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 MYO1BO43795 1136 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 LIG1P18858 919 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 ANAPC15P60006 121 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 CCDC102BQ68D86 513 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 CCDC186Q7Z3E2 898 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
NDFIP2-201ENST00000218652 CEP135Q66GS9 1140 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 CTR9Q6PD62 1173 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 JADE2Q9NQC1 790 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 ANXA1P04083 346 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 BRF1Q92994 677 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 EVI5LQ96CN4 794 aa17.27■□□□□ 0.36
NDFIP2-201ENST00000218652 DYNC1I1O14576 645 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 HOOK3Q86VS8 718 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 TRMT112Q9UI30 125 aaKnown RBP17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 N4BP3O15049 544 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 NEK1Q96PY6 1258 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.35
NDFIP2-201ENST00000218652 FGFR1OPO95684 399 aaKnown RBP17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 PI4KAP2A4QPH2 592 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 PI4KAP1Q8N8J0 262 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 RPGRIP1LQ68CZ1 1315 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 AKR1B10O60218 316 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 GPTP24298 496 aa17.26■□□□□ 0.35
NDFIP2-201ENST00000218652 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 TMEM266Q2M3C6 531 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 CCDC40Q4G0X9 1142 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 RNF41Q9H4P4 317 aaPredicted RBP17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 SKILP12757 684 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 PRIMPOLQ96LW4 560 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 NAA15Q9BXJ9 866 aaKnown RBP17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 VAT1LQ9HCJ6 419 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 TCP11L1Q9NUJ3 509 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 MCM6Q14566 821 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 NOLC1Q14978 699 aaKnown RBP eCLIP17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 MAATS1Q7Z4T9 603 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
NDFIP2-201ENST00000218652 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 DNAI1Q9UI46 699 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 LRSAM1Q6UWE0 723 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 V9GYY5 206 aaPredicted RBP17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 FOXO3O43524 673 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 SDSP20132 328 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 ZBTB9Q96C00 473 aa17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 CCDC97Q96F63 343 aaPredicted RBP17.24■□□□□ 0.35
NDFIP2-201ENST00000218652 CAVIN2O95810 425 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 CLCN1P35523 988 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 GPATCH11Q8N954 259 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 KIF20AO95235 890 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 UBASH3AP57075 661 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 MICALCLQ6ZW33 695 aa17.23■□□□□ 0.35
NDFIP2-201ENST00000218652 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms