RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 GJB2P29033 226 aa24.35■■□□□ 1.49
RCN1-201ENST00000054950 BEND3Q5T5X7 828 aa24.35■■□□□ 1.49
RCN1-201ENST00000054950 PRPF40BQ6NWY9 871 aaKnown RBP24.35■■□□□ 1.49
RCN1-201ENST00000054950 UBE2HP62256 183 aa24.34■■□□□ 1.49
RCN1-201ENST00000054950 JAKMIP1Q96N16 626 aaKnown RBP24.34■■□□□ 1.49
RCN1-201ENST00000054950 HYPKQ9NX55 129 aa24.34■■□□□ 1.49
RCN1-201ENST00000054950 PA2G4Q9UQ80 394 aaKnown RBP24.34■■□□□ 1.49
RCN1-201ENST00000054950 DYNC1I1O14576 645 aa24.33■■□□□ 1.49
RCN1-201ENST00000054950 DNAAF4Q8WXU2 420 aa24.33■■□□□ 1.49
RCN1-201ENST00000054950 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.33■■□□□ 1.49
RCN1-201ENST00000054950 DIP2AQ14689 1571 aa24.33■■□□□ 1.49
RCN1-201ENST00000054950 AP5Z1O43299 807 aa24.33■■□□□ 1.48
RCN1-201ENST00000054950 ST3GAL1Q11201 340 aa24.33■■□□□ 1.48
RCN1-201ENST00000054950 ABTB2Q8N961 1025 aa24.33■■□□□ 1.48
RCN1-201ENST00000054950 NECAB1Q8N987 351 aa24.33■■□□□ 1.48
RCN1-201ENST00000054950 DIAPH3Q9NSV4 1193 aa24.33■■□□□ 1.48
RCN1-201ENST00000054950 FAM184AQ8NB25 1140 aa24.32■■□□□ 1.48
RCN1-201ENST00000054950 EIF4A1P60842 406 aaKnown RBP24.32■■□□□ 1.48
RCN1-201ENST00000054950 VPS37CA5D8V6 355 aaPredicted RBP24.31■■□□□ 1.48
RCN1-201ENST00000054950 FAM177BA6PVY3 158 aa24.31■■□□□ 1.48
RCN1-201ENST00000054950 EPB41L2O43491 1005 aaKnown RBP24.31■■□□□ 1.48
RCN1-201ENST00000054950 MTMR6Q9Y217 621 aa24.31■■□□□ 1.48
RCN1-201ENST00000054950 UVSSAQ2YD98 709 aa24.31■■□□□ 1.48
RCN1-201ENST00000054950 CHMP3Q9Y3E7 222 aa24.31■■□□□ 1.48
RCN1-201ENST00000054950 PDRG1Q9NUG6 133 aa24.3■■□□□ 1.48
RCN1-201ENST00000054950 NOLC1Q14978 699 aaKnown RBP eCLIP24.3■■□□□ 1.48
RCN1-201ENST00000054950 PIBF1Q8WXW3 757 aa24.3■■□□□ 1.48
RCN1-201ENST00000054950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.3■■□□□ 1.48
RCN1-201ENST00000054950 MARF1Q9Y4F3 1742 aaKnown RBP24.29■■□□□ 1.48
RCN1-201ENST00000054950 FAM173BQ6P4H8 233 aa24.29■■□□□ 1.48
RCN1-201ENST00000054950 FUCA2Q9BTY2 467 aa24.29■■□□□ 1.48
RCN1-201ENST00000054950 ADCY9O60503 1353 aa24.28■■□□□ 1.48
RCN1-201ENST00000054950 ME3Q16798 604 aa24.28■■□□□ 1.48
RCN1-201ENST00000054950 KDM4AO75164 1064 aa24.28■■□□□ 1.48
RCN1-201ENST00000054950 TCEANC2Q96MN5 208 aa24.28■■□□□ 1.48
RCN1-201ENST00000054950 GLRX3O76003 335 aaKnown RBP24.27■■□□□ 1.48
RCN1-201ENST00000054950 FERMT3Q86UX7 667 aa24.27■■□□□ 1.48
RCN1-201ENST00000054950 NBPF6Q5VWK0 638 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 NBPF4Q96M43 638 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 EID1Q9Y6B2 187 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 PROSER3Q2NL68 480 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
RCN1-201ENST00000054950 SPC24Q8NBT2 197 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 FAM227BQ96M60 508 aa24.26■■□□□ 1.47
RCN1-201ENST00000054950 CRYBG1Q9Y4K1 1723 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 CLASRPQ8N2M8 674 aaKnown RBP24.25■■□□□ 1.47
RCN1-201ENST00000054950 MYRIPQ8NFW9 859 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 MPRIPQ6WCQ1 1025 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 MAP7D2Q96T17 732 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 BABAM1Q9NWV8 329 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 CEMIPQ8WUJ3 1361 aa24.25■■□□□ 1.47
RCN1-201ENST00000054950 PRAMEF22A3QJZ6 481 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 TPCN1Q9ULQ1 816 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 CYP46A1Q9Y6A2 500 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 TTC41PQ6P2S7 1318 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 VPS53Q5VIR6 699 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 ZSWIM6Q9HCJ5 1215 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 ECHDC1Q9NTX5 307 aa24.24■■□□□ 1.47
RCN1-201ENST00000054950 USP42Q9H9J4 1324 aaKnown RBP24.23■■□□□ 1.47
RCN1-201ENST00000054950 LETM1O95202 739 aaPredicted RBP24.23■■□□□ 1.47
RCN1-201ENST00000054950 MAP3K2Q9Y2U5 619 aa24.23■■□□□ 1.47
RCN1-201ENST00000054950 ATP6V1DQ9Y5K8 247 aa24.23■■□□□ 1.47
RCN1-201ENST00000054950 TAF6LQ9Y6J9 622 aa24.23■■□□□ 1.47
RCN1-201ENST00000054950 AACSQ86V21 672 aa24.23■■□□□ 1.47
RCN1-201ENST00000054950 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
RCN1-201ENST00000054950 KCNF1Q9H3M0 494 aa24.23■■□□□ 1.47
RCN1-201ENST00000054950 RBM8AQ9Y5S9 174 aaKnown RBP24.23■■□□□ 1.47
RCN1-201ENST00000054950 IFIT2P09913 472 aaKnown RBP24.22■■□□□ 1.47
RCN1-201ENST00000054950 CAMK4Q16566 473 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 CDC37L1Q7L3B6 337 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 C9orf78Q9NZ63 289 aaPredicted RBP24.22■■□□□ 1.47
RCN1-201ENST00000054950 PYCARDQ9ULZ3 195 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 KCNJ4P48050 445 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 HSP90AB4PQ58FF6 505 aa24.22■■□□□ 1.47
RCN1-201ENST00000054950 RBM33Q96EV2 1170 aaKnown RBP24.22■■□□□ 1.47
RCN1-201ENST00000054950 CCDC171Q6TFL3 1326 aa24.21■■□□□ 1.47
RCN1-201ENST00000054950 NECTIN1Q15223 517 aa24.21■■□□□ 1.47
RCN1-201ENST00000054950 TTC6Q86TZ1 520 aa24.21■■□□□ 1.47
RCN1-201ENST00000054950 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
RCN1-201ENST00000054950 CCDC8Q9H0W5 538 aaPredicted RBP24.21■■□□□ 1.47
RCN1-201ENST00000054950 ZNF710Q8N1W2 664 aa24.21■■□□□ 1.47
RCN1-201ENST00000054950 TLR7Q9NYK1 1049 aaKnown RBP24.21■■□□□ 1.47
RCN1-201ENST00000054950 NMIQ13287 307 aaPredicted RBP24.2■■□□□ 1.47
RCN1-201ENST00000054950 CREB3L3Q68CJ9 461 aa24.2■■□□□ 1.47
RCN1-201ENST00000054950 KCNA6P17658 529 aa24.2■■□□□ 1.46
RCN1-201ENST00000054950 LIG1P18858 919 aa24.2■■□□□ 1.46
RCN1-201ENST00000054950 TEFQ10587 303 aa24.2■■□□□ 1.46
RCN1-201ENST00000054950 PRDM10Q9NQV6 1147 aa24.19■■□□□ 1.46
RCN1-201ENST00000054950 LARP1BQ659C4 914 aaKnown RBP24.19■■□□□ 1.46
RCN1-201ENST00000054950 TBX22Q9Y458 520 aa24.18■■□□□ 1.46
RCN1-201ENST00000054950 LTN1O94822 1766 aa24.18■■□□□ 1.46
RCN1-201ENST00000054950 ZNF530Q6P9A1 599 aaPredicted RBP24.18■■□□□ 1.46
RCN1-201ENST00000054950 SIL1Q9H173 461 aa24.18■■□□□ 1.46
RCN1-201ENST00000054950 RGPD2P0DJD1 1756 aa24.17■■□□□ 1.46
RCN1-201ENST00000054950 EAF2Q96CJ1 260 aaPredicted RBP24.17■■□□□ 1.46
RCN1-201ENST00000054950 SH2B1Q9NRF2 756 aaPredicted RBP24.17■■□□□ 1.46
RCN1-201ENST00000054950 A0A0D9SFI3 127 aa24.17■■□□□ 1.46
RCN1-201ENST00000054950 STK3Q13188 491 aa24.17■■□□□ 1.46
RCN1-201ENST00000054950 KLHDC4Q8TBB5 520 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms