RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ank1Q02357 1862 aa12.33□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Col4a1P02463 1669 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Hspa2P17156 633 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Slc39a6Q8C145 765 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Efcab2Q9CQ46 164 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Txnrd1Q9JMH6 613 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 InsrrQ9WTL4 1300 aa12.32□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm45015A0A140LII9 184 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm18336A0A140LIU8 765 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Phactr2B1AVP0 632 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ppfia1B2RXQ2 1266 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Atp6v1dP57746 247 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Strn4P58404 760 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Slc5a1Q8C3K6 665 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Trim52Q8CDV4 233 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ints5Q8CHT3 1018 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Edc3Q8K2D3 508 aaKnown RBP12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Sf3a1Q8K4Z5 791 aaKnown RBP12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Col22a1E9Q7P1 1613 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Shank3Q4ACU6 1730 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Smarce1O54941 411 aaKnown RBP12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ets1P27577 440 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Pde3bQ61409 1100 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ankle2Q6P1H6 964 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Filip1lQ6P6L0 1131 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Tmx3Q8BXZ1 456 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 KinQ8K339 391 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Slx4ipQ9D7Y9 413 aa12.31□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Erbb4Q61527 1308 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Tbc1d4Q8BYJ6 1307 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm21663A0A0G2JE01 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm7361D3Z6R1 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 5031410I06RikE9Q4E0 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm1979E9QAN3 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm5862K7N5V5 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Gm10220K7N660 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Il4rP16382 810 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Zpr1Q62384 459 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Speer4bQ9D9F7 267 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 AceP09470 1312 aa12.3□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ddx19aQ61655 478 aaKnown RBP12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Flad1Q8R123 492 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Top1mtQ8R4U6 593 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 ZgpatQ8VDM1 511 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Kcnb2A6H8H5 907 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Elmsan1E9Q2I4 1089 aaKnown RBP12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 ImpactO55091 318 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Adora1Q60612 326 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Zbtb40Q6PCS8 1258 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ddx58Q6Q899 926 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ints3Q7TPD0 1041 aaKnown RBP12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 PappaQ8R4K8 1624 aa12.29□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ric1Q69ZJ7 1422 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Cdhr2E9Q7P9 1308 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 NmiO35309 314 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ifit2Q64112 472 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Ubxn10Q8BG34 277 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Tmem87bQ8BKU8 555 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Slc26a8Q8R0C3 999 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Bag3Q9JLV1 577 aaKnown RBP12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Mrc1Q61830 1456 aa12.28□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Zbtb45Q52KG4 520 aa12.27□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 DekQ7TNV0 380 aaKnown RBP12.27□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 4930504O13RikQ8C5Z9 145 aa12.27□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 SnrkQ8VDU5 748 aa12.27□□□□□ -0.44
Cpsf3-211ENSMUST00000222968 Syde2E9PUP1 1314 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Pard3Q99NH2 1333 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 HdgfP51859 237 aaKnown RBP12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Gjb2Q00977 226 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 GpkowQ56A08 488 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 St18Q80TY4 1045 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Dnttip2Q8R2M2 758 aaKnown RBP12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Rufy3Q9D394 469 aa12.27□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Gnat3Q3V3I2 354 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Soga3Q6NZL0 945 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Phf14Q9D4H9 881 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 AtrnQ9WU60 1428 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Nphp3Q7TNH6 1325 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Sipa1l3G3X9J0 1776 aa12.26□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Gm21680A0A0G2JGR8 267 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 1700006A11RikB9EHI3 544 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 DbnlQ62418 436 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Fkbp5Q64378 456 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ddx11Q6AXC6 880 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Sgsm2Q80U12 1005 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Dmrt2Q8BG36 561 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Marf1Q8BJ34 1730 aaKnown RBP12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Rhot2Q8JZN7 620 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Il1rapl2Q9ERS6 686 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Mst1rQ62190 1378 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 AK157302I3ITR1 129 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Tti2Q8BGV4 512 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Chmp4cQ9D7F7 232 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Isca1Q9D924 129 aa12.25□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Akap11E9Q777 1895 aa12.24□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ak2Q9WTP6 239 aa12.24□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Abca3Q8R420 1704 aa12.24□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Crb1Q8VHS2 1405 aa12.24□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Rbm8a2A0A0N4SUH6 174 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Gm9992B2RWK3 458 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms