RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Tmc1Q8R4P5 757 aa13.27□□□□□ -0.29
Lig3-212ENSMUST00000173727 Nhsl1Q8CAF4 1587 aa13.27□□□□□ -0.29
Lig3-212ENSMUST00000173727 Sgsm1Q8BPQ7 1093 aa13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Gnl3lQ6PGG6 577 aaKnown RBP13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ripor2Q80U16 1078 aa13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Gigyf1Q99MR1 1044 aaKnown RBP13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Nip7Q9CXK8 180 aaKnown RBP13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 NmiO35309 314 aa13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Klc3Q91W40 508 aa13.26□□□□□ -0.29
Lig3-212ENSMUST00000173727 Nek4Q9Z1J2 792 aa13.25□□□□□ -0.29
Lig3-212ENSMUST00000173727 VgfQ0VGU4 617 aa13.25□□□□□ -0.29
Lig3-212ENSMUST00000173727 Stard3nlQ9DCI3 235 aa13.25□□□□□ -0.29
Lig3-212ENSMUST00000173727 Tbc1d32Q3URV1 1296 aa13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Bsdc1Q80Y55 427 aa13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Bcar3Q9QZK2 820 aa13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Rtn4Q99P72 1162 aaKnown RBP13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Pa2g4P50580 394 aaKnown RBP13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Cwc25Q9DBF7 416 aa13.24□□□□□ -0.29
Lig3-212ENSMUST00000173727 Hoxa7P02830 229 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Myd88P22366 296 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 GpkowQ56A08 488 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ankib1Q6ZPS6 1085 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 MetP16056 1379 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Cct4P80315 539 aaKnown RBP13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Tbc1d9Q3UYK3 1264 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Gnat3Q3V3I2 354 aa13.23□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ank1Q02357 1862 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Zkscan2G3X952 960 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 AK157302I3ITR1 129 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Nlrp9bQ66X22 1003 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ptpdc1Q6NZK8 747 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Dnttip2Q8R2M2 758 aaKnown RBP13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Isca1Q9D924 129 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Zbtb1Q91VL9 713 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 CenppQ9CZ92 286 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ltbp1Q8CG19 1712 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Sos2Q02384 1333 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 InsrrQ9WTL4 1300 aa13.22□□□□□ -0.29
Lig3-212ENSMUST00000173727 Kndc1Q0KK55 1742 aa13.21□□□□□ -0.29
Lig3-212ENSMUST00000173727 Ltb4r2Q9JJL9 360 aa13.21□□□□□ -0.29
Lig3-212ENSMUST00000173727 Rps6ka4Q9Z2B9 773 aa13.21□□□□□ -0.29
Lig3-212ENSMUST00000173727 Taok2Q6ZQ29 1240 aa13.21□□□□□ -0.29
Lig3-212ENSMUST00000173727 AbraQ8BUZ1 375 aa13.21□□□□□ -0.29
Lig3-212ENSMUST00000173727 Zbtb3Q91X45 518 aa13.21□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ehd4Q9EQP2 541 aa13.21□□□□□ -0.3
Lig3-212ENSMUST00000173727 Abcc4E9Q236 1325 aa13.21□□□□□ -0.3
Lig3-212ENSMUST00000173727 Hmox1P14901 289 aa13.2□□□□□ -0.3
Lig3-212ENSMUST00000173727 Sipa1l3G3X9J0 1776 aa13.2□□□□□ -0.3
Lig3-212ENSMUST00000173727 Nlrp3Q8R4B8 1033 aa13.2□□□□□ -0.3
Lig3-212ENSMUST00000173727 Rapgef4Q9EQZ6 1011 aa13.2□□□□□ -0.3
Lig3-212ENSMUST00000173727 Anapc15-psA0A140T8L6 141 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 AU015836B2RUM3 263 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Adora1Q60612 326 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Miga2Q8BK03 593 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Smc4Q8CG47 1286 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Kiaa0232Q80U59 1396 aaKnown RBP13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Tmem87bQ8BKU8 555 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Fam213aQ9CYH2 218 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 GakQ99KY4 1305 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Adam1aQ60813 791 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Q9D2X8 372 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Mrc1Q61830 1456 aa13.19□□□□□ -0.3
Lig3-212ENSMUST00000173727 Bicdl1A0JNT9 577 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 NexnQ7TPW1 607 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Pdcl3Q8BVF2 240 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Taok3Q8BYC6 898 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Rabep1O35551 862 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Pdia3P27773 505 aaKnown RBP13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Q8C5K5 320 aa13.18□□□□□ -0.3
Lig3-212ENSMUST00000173727 Jarid2Q62315 1234 aa13.17□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ttc19Q8CC21 365 aa13.17□□□□□ -0.3
Lig3-212ENSMUST00000173727 Tpx2A2APB8 745 aaKnown RBP13.17□□□□□ -0.3
Lig3-212ENSMUST00000173727 Abca3Q8R420 1704 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ppp1r9bQ6R891 817 aaKnown RBP13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 Dmrt2Q8BG36 561 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 GorabQ8BRM2 368 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 Prr5lA2AVJ5 370 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ets1P27577 440 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 RestQ8VIG1 1082 aa13.16□□□□□ -0.3
Lig3-212ENSMUST00000173727 4930523C07RikE9Q2T4 99 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ppfibp2O35711 882 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 AppP12023 770 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Htatsf1Q8BGC0 757 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Ppp6r3Q922D4 844 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Prr29B1ARI9 187 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Strn4P58404 760 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Nucb1Q02819 459 aaKnown RBP13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Q8BT18 775 aa13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Edc3Q8K2D3 508 aaKnown RBP13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Zcrb1Q9CZ96 217 aaKnown RBP13.15□□□□□ -0.3
Lig3-212ENSMUST00000173727 Smarcc1P97496 1104 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Nol10Q5RJG1 687 aaKnown RBP13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Esco1Q69Z69 843 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Ric1Q69ZJ7 1422 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Igflr1Q3U4N7 345 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Fnbp4Q6ZQ03 1031 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Noc3lQ8VI84 807 aaKnown RBP13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Ssc5dQ8BV57 1371 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 CalcaP70160 136 aa13.14□□□□□ -0.31
Lig3-212ENSMUST00000173727 Slf2Q6P9P0 1278 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms