RNA–Protein interactions for RNA: ENSMUST00000170391.1

Chd7-206, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

TSL 5 BASIC

Gene Chd7, Length 3,462 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-206ENSMUST00000170391 Atg4a-psA0A0G2JFS9 396 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Mtx1P47802 317 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Bcl2l13P59017 434 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Cnnm3Q32NY4 713 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Rreb1Q3UH06 1700 aaKnown RBP12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Atg4aQ8C9S8 396 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Ppp1r42Q8R1Z4 357 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Hmgn5Q9JL35 406 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Nphp1Q9QY53 687 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Cps1Q8C196 1500 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Mum1Q6DID5 682 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 Slx4ipQ9D7Y9 413 aa12.85□□□□□ -0.35
Chd7-206ENSMUST00000170391 MycnP03966 462 aaKnown RBP12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Hoxc9P09633 260 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Ints3Q7TPD0 1041 aaKnown RBP12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Zscan22Q8BGS5 496 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Stx6Q9JKK1 255 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Mctp1E9PV86 951 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 TatQ8QZR1 454 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Pmfbp1Q9WVQ0 1022 aa12.84□□□□□ -0.35
Chd7-206ENSMUST00000170391 Brpf1B2RRD7 1212 aa12.83□□□□□ -0.35
Chd7-206ENSMUST00000170391 Slc4a10Q5DTL9 1118 aa12.83□□□□□ -0.35
Chd7-206ENSMUST00000170391 Amotl2Q8K371 772 aa12.83□□□□□ -0.35
Chd7-206ENSMUST00000170391 Nlrp3Q8R4B8 1033 aa12.83□□□□□ -0.35
Chd7-206ENSMUST00000170391 Sirt1Q923E4 737 aa12.83□□□□□ -0.36
Chd7-206ENSMUST00000170391 TnmdQ9EP64 317 aa12.83□□□□□ -0.36
Chd7-206ENSMUST00000170391 Tpm1P58771 284 aa12.83□□□□□ -0.36
Chd7-206ENSMUST00000170391 Cfap157Q0VFX2 523 aa12.83□□□□□ -0.36
Chd7-206ENSMUST00000170391 Zscan29E9Q5B4 869 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Fyb1O35601 819 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Frat1P70339 274 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ptpdc1Q6NZK8 747 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 CtifQ6PEE2 600 aaKnown RBP12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Bicd2Q921C5 820 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Rbm33Q9CXK9 1231 aaKnown RBP12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Znf335A2A5K6 1337 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Mdc1Q5PSV9 1707 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Cdk12Q14AX6 1484 aaKnown RBP12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Fkbp4P30416 458 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 Igsf3Q6ZQA6 1194 aa12.82□□□□□ -0.36
Chd7-206ENSMUST00000170391 F2rP30558 430 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Stk3Q9JI10 497 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Lcmt1A0A0U1RNF2 332 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Kif2aP28740 705 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Map3k13Q1HKZ5 959 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Wdr93Q402B2 695 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Pdzrn3Q69ZS0 1063 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ccdc66Q6NS45 935 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Fbxo3Q9DC63 480 aa12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 AatfQ9JKX4 526 aaKnown RBP12.81□□□□□ -0.36
Chd7-206ENSMUST00000170391 Capn2O08529 700 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Dnajc2P54103 621 aaKnown RBP12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Tyro3P55144 880 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Erich4Q3UNU4 136 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Dmrt2Q8BG36 561 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ube2q2Q8K2Z8 378 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 RestQ8VIG1 1082 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Syt10Q9R0N4 523 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Slit3Q9WVB4 1523 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 4930407I10RikD3Z5T8 1512 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Exoc6bA6H5Z3 810 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Gjb2Q00977 226 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Arglu1Q3UL36 271 aaKnown RBP12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Gsdma3Q5Y4Y6 464 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Wdr24Q8CFJ9 790 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ifi35Q9D8C4 286 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 CemipQ8BI06 1361 aa12.8□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ccdc162pQ0VG85 912 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ddx19aQ61655 478 aaKnown RBP12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Rab3gap1Q80UJ7 981 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Abcc10Q8R4P9 1501 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Wdr33Q8K4P0 1330 aaKnown RBP12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Calcoco2A2A6M5 331 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Strn4P58404 760 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Paxbp1P58501 919 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Spag5Q7TME2 1165 aa12.79□□□□□ -0.36
Chd7-206ENSMUST00000170391 Zfp597E9Q6S0 419 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Cfdp1O88271 295 aaKnown RBP12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Arhgap4B1AUY3 965 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ccdc34Q3UI66 367 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Nfe2l3Q9WTM4 660 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ap5z1Q3U829 807 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 TfrcQ62351 763 aaKnown RBP12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Cyp2d12Q8BVD2 504 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 Ndufa8Q9DCJ5 172 aa12.78□□□□□ -0.36
Chd7-206ENSMUST00000170391 L1td1Q587J6 782 aaKnown RBP12.77□□□□□ -0.36
Chd7-206ENSMUST00000170391 Mphosph10Q810V0 681 aaKnown RBP12.77□□□□□ -0.36
Chd7-206ENSMUST00000170391 Rtel1Q0VGM9 1203 aa12.77□□□□□ -0.37
Chd7-206ENSMUST00000170391 GphnQ8BUV3 769 aaKnown RBP12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Foxp4Q9DBY0 795 aaKnown RBP12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Arid5bQ8BM75 1188 aaKnown RBP12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Cnpy2Q9QXT0 182 aa12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Chd2E9PZM4 1827 aaKnown RBP12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 FosbP13346 338 aa12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Cd22P35329 862 aa12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Zap70P43404 618 aa12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Ccz1Q8C1Y8 480 aa12.76□□□□□ -0.37
Chd7-206ENSMUST00000170391 Utp18Q5SSI6 552 aaKnown RBP12.75□□□□□ -0.37
Chd7-206ENSMUST00000170391 Pnpla2Q8BJ56 486 aa12.75□□□□□ -0.37
Chd7-206ENSMUST00000170391 Elmsan1E9Q2I4 1089 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms