RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Olfr819K7N727 320 aa28.62■■■□□ 2.17
Shox2-204ENSMUST00000162439 Mex3cQ05A36 652 aaKnown RBP28.62■■■□□ 2.17
Shox2-204ENSMUST00000162439 Hspa2P17156 633 aa28.61■■■□□ 2.17
Shox2-204ENSMUST00000162439 Rtkn2Q14B46 604 aa28.61■■■□□ 2.17
Shox2-204ENSMUST00000162439 Znf428Q8C1M2 176 aa28.61■■■□□ 2.17
Shox2-204ENSMUST00000162439 Trim34aQ99PP6 485 aa28.61■■■□□ 2.17
Shox2-204ENSMUST00000162439 Q3TQI7 289 aaKnown RBP28.6■■■□□ 2.17
Shox2-204ENSMUST00000162439 Uspl1Q3ULM6 1089 aa28.6■■■□□ 2.17
Shox2-204ENSMUST00000162439 Zscan21Q07231 555 aa28.59■■■□□ 2.17
Shox2-204ENSMUST00000162439 Gnl3lQ6PGG6 577 aaKnown RBP28.59■■■□□ 2.17
Shox2-204ENSMUST00000162439 Rbm5Q91YE7 815 aaKnown RBP28.59■■■□□ 2.17
Shox2-204ENSMUST00000162439 Col24a1Q30D77 1733 aa28.58■■■□□ 2.17
Shox2-204ENSMUST00000162439 PsapQ61207 557 aaKnown RBP28.58■■■□□ 2.17
Shox2-204ENSMUST00000162439 Susd4Q8BH32 490 aa28.58■■■□□ 2.17
Shox2-204ENSMUST00000162439 Stra8P70278 393 aa28.57■■■□□ 2.16
Shox2-204ENSMUST00000162439 Dok7Q18PE0 504 aa28.57■■■□□ 2.16
Shox2-204ENSMUST00000162439 PgfP49764 158 aa28.56■■■□□ 2.16
Shox2-204ENSMUST00000162439 Strip1Q8C079 837 aa28.56■■■□□ 2.16
Shox2-204ENSMUST00000162439 Upf1Q9EPU0 1124 aaKnown RBP28.56■■■□□ 2.16
Shox2-204ENSMUST00000162439 Cct4P80315 539 aaKnown RBP28.54■■■□□ 2.16
Shox2-204ENSMUST00000162439 Stk32bQ9JJX8 414 aa28.54■■■□□ 2.16
Shox2-204ENSMUST00000162439 Setdb1O88974 1307 aa28.53■■■□□ 2.16
Shox2-204ENSMUST00000162439 NpcdF8VQB8 469 aa28.53■■■□□ 2.16
Shox2-204ENSMUST00000162439 Dpf2Q61103 391 aaKnown RBP28.53■■■□□ 2.16
Shox2-204ENSMUST00000162439 Atxn2lQ7TQH0 1049 aaKnown RBP28.53■■■□□ 2.16
Shox2-204ENSMUST00000162439 Zfp831A2ADM8 1628 aa28.53■■■□□ 2.16
Shox2-204ENSMUST00000162439 Plekhh1Q80TI1 1356 aa28.52■■■□□ 2.16
Shox2-204ENSMUST00000162439 Atp2b4Q6Q477 1205 aa28.52■■■□□ 2.16
Shox2-204ENSMUST00000162439 Usp16Q99LG0 825 aa28.52■■■□□ 2.16
Shox2-204ENSMUST00000162439 Foxo3Q9WVH4 672 aa28.52■■■□□ 2.16
Shox2-204ENSMUST00000162439 Atp6v0a2P15920 856 aa28.5■■■□□ 2.15
Shox2-204ENSMUST00000162439 Fkbp1aP26883 108 aaKnown RBP28.5■■■□□ 2.15
Shox2-204ENSMUST00000162439 Gnai1B2RSH2 354 aa28.49■■■□□ 2.15
Shox2-204ENSMUST00000162439 Csf1rP09581 977 aa28.49■■■□□ 2.15
Shox2-204ENSMUST00000162439 Ankle2Q6P1H6 964 aa28.49■■■□□ 2.15
Shox2-204ENSMUST00000162439 Gnai3Q9DC51 354 aa28.49■■■□□ 2.15
Shox2-204ENSMUST00000162439 Thrap3Q569Z6 951 aaKnown RBP28.48■■■□□ 2.15
Shox2-204ENSMUST00000162439 Morc2aQ69ZX6 1030 aa28.48■■■□□ 2.15
Shox2-204ENSMUST00000162439 Soga3Q6NZL0 945 aa28.48■■■□□ 2.15
Shox2-204ENSMUST00000162439 Ankib1Q6ZPS6 1085 aa28.48■■■□□ 2.15
Shox2-204ENSMUST00000162439 Atxn3Q9CVD2 355 aa28.48■■■□□ 2.15
Shox2-204ENSMUST00000162439 Aknad1E9Q8N6 675 aa28.47■■■□□ 2.15
Shox2-204ENSMUST00000162439 Cdc37l1Q9CZP7 335 aa28.47■■■□□ 2.15
Shox2-204ENSMUST00000162439 Zfp646Q6NV66 1788 aa28.47■■■□□ 2.15
Shox2-204ENSMUST00000162439 Eva1cP58659 440 aa28.46■■■□□ 2.15
Shox2-204ENSMUST00000162439 SobpQ0P5V2 864 aa28.46■■■□□ 2.15
Shox2-204ENSMUST00000162439 Socs7Q8VHQ2 579 aa28.46■■■□□ 2.15
Shox2-204ENSMUST00000162439 Ppp1r3fQ9JIG4 799 aa28.46■■■□□ 2.15
Shox2-204ENSMUST00000162439 Usp48Q3V0C5 1052 aa28.45■■■□□ 2.14
Shox2-204ENSMUST00000162439 Ttc5Q99LG4 440 aa28.45■■■□□ 2.14
Shox2-204ENSMUST00000162439 Gja3Q64448 417 aa28.44■■■□□ 2.14
Shox2-204ENSMUST00000162439 Zbtb40Q6PCS8 1258 aa28.44■■■□□ 2.14
Shox2-204ENSMUST00000162439 Rasgrp4Q8BTM9 673 aa28.44■■■□□ 2.14
Shox2-204ENSMUST00000162439 Ankrd31A0A140LI88 1765 aa28.43■■■□□ 2.14
Shox2-204ENSMUST00000162439 Stxbp5lQ5DQR4 1185 aa28.43■■■□□ 2.14
Shox2-204ENSMUST00000162439 Insm1Q63ZV0 521 aa28.43■■■□□ 2.14
Shox2-204ENSMUST00000162439 BcorQ8CGN4 1759 aa28.42■■■□□ 2.14
Shox2-204ENSMUST00000162439 Flt4P35917 1363 aa28.42■■■□□ 2.14
Shox2-204ENSMUST00000162439 Ltb4r2Q9JJL9 360 aa28.42■■■□□ 2.14
Shox2-204ENSMUST00000162439 Rbm46P86049 533 aa28.41■■■□□ 2.14
Shox2-204ENSMUST00000162439 Vil1Q62468 827 aa28.41■■■□□ 2.14
Shox2-204ENSMUST00000162439 Flt1P35969 1333 aa28.41■■■□□ 2.14
Shox2-204ENSMUST00000162439 Gpr101Q80T62 511 aa28.4■■■□□ 2.14
Shox2-204ENSMUST00000162439 Hsp90ab1P11499 724 aaKnown RBP28.39■■■□□ 2.14
Shox2-204ENSMUST00000162439 Hoxd11P23813 323 aa28.39■■■□□ 2.14
Shox2-204ENSMUST00000162439 Scn9aQ62205 1984 aa28.39■■■□□ 2.13
Shox2-204ENSMUST00000162439 Pcsk7Q61139 770 aa28.38■■■□□ 2.13
Shox2-204ENSMUST00000162439 Rbm17Q8JZX4 405 aaKnown RBP28.38■■■□□ 2.13
Shox2-204ENSMUST00000162439 Map3k9Q3U1V8 1077 aa28.37■■■□□ 2.13
Shox2-204ENSMUST00000162439 VwdeQ6DFV8 926 aa28.37■■■□□ 2.13
Shox2-204ENSMUST00000162439 PdgfdQ925I7 370 aa28.37■■■□□ 2.13
Shox2-204ENSMUST00000162439 Psd3Q2PFD7 1037 aa28.36■■■□□ 2.13
Shox2-204ENSMUST00000162439 Mrs2Q5NCE8 434 aa28.36■■■□□ 2.13
Shox2-204ENSMUST00000162439 Gja10Q9WUS4 505 aa28.36■■■□□ 2.13
Shox2-204ENSMUST00000162439 Disp3A3KFU9 1347 aa28.36■■■□□ 2.13
Shox2-204ENSMUST00000162439 Btaf1E9QAE3 1848 aa28.36■■■□□ 2.13
Shox2-204ENSMUST00000162439 Cnksr1A2A9K7 700 aa28.35■■■□□ 2.13
Shox2-204ENSMUST00000162439 Igflr1Q3U4N7 345 aa28.35■■■□□ 2.13
Shox2-204ENSMUST00000162439 Ank1Q02357 1862 aa28.35■■■□□ 2.13
Shox2-204ENSMUST00000162439 Sh3tc1G3X9F6 1346 aa28.35■■■□□ 2.13
Shox2-204ENSMUST00000162439 Zc3h15Q3TIV5 426 aaKnown RBP28.34■■■□□ 2.13
Shox2-204ENSMUST00000162439 Neurod2Q62414 383 aa28.34■■■□□ 2.13
Shox2-204ENSMUST00000162439 CrbnQ8C7D2 445 aa28.34■■■□□ 2.13
Shox2-204ENSMUST00000162439 WaslQ91YD9 501 aa28.34■■■□□ 2.13
Shox2-204ENSMUST00000162439 Mybbp1aQ7TPV4 1344 aaKnown RBP28.34■■■□□ 2.13
Shox2-204ENSMUST00000162439 Nup188Q6ZQH8 1759 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 AK157302I3ITR1 129 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Chrna5Q2MKA5 467 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Irf9Q61179 399 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 DaglaQ6WQJ1 1044 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Ncbp3Q8BZR9 615 aaKnown RBP28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Glis2Q8VDL9 521 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Isca1Q9D924 129 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Ttc41Q692V3 1318 aa28.32■■■□□ 2.12
Shox2-204ENSMUST00000162439 Glg1Q61543 1175 aaKnown RBP28.31■■■□□ 2.12
Shox2-204ENSMUST00000162439 Bicc1Q99MQ1 977 aaKnown RBP28.31■■■□□ 2.12
Shox2-204ENSMUST00000162439 Myh1Q5SX40 1942 aa28.3■■■□□ 2.12
Shox2-204ENSMUST00000162439 MypnQ5DTJ9 1315 aa28.3■■■□□ 2.12
Shox2-204ENSMUST00000162439 Cyp2d11P24457 504 aa28.3■■■□□ 2.12
Shox2-204ENSMUST00000162439 Cyp19a1P28649 503 aa28.3■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 963 ms