RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Arhgef28P97433 1693 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Dixdc1Q80Y83 711 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Fam177a1Q8BR63 207 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Oas2E9Q9A9 742 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 EzrP26040 586 aaKnown RBP13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Mctp2Q5RJH2 878 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Cchcr1Q8K2I2 770 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Med4Q9CQA5 270 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 SetQ9EQU5 289 aaKnown RBP13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Chpf2Q3UU43 768 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Oxsr1Q6P9R2 527 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Cyp2d12Q8BVD2 504 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Nup88Q8CEC0 753 aaKnown RBP13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Mrpl50Q8VDT9 159 aaKnown RBP13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Irx4Q9QY61 515 aa13.62□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Mmp14P53690 582 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ppfia3P60469 1194 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Pkp1P97350 728 aaKnown RBP13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Irf6P97431 467 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 MlecQ6ZQI3 291 aaKnown RBP13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Tti2Q8BGV4 512 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Rad50P70388 1312 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Rnf123Q5XPI3 1314 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Prr29B1ARI9 187 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Psme1P97371 249 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Txndc2Q6P902 515 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Dnajc5gQ8C632 165 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Spata31d1bE9QA57 1361 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Zkscan7E9PVW1 718 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Nfatc2ipO09130 412 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Zap70P43404 618 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Nlrp3Q8R4B8 1033 aa13.61□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Spef2Q8C9J3 1734 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Gm45140A0A0N4SUM8 220 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 FosbP13346 338 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Nucb2P81117 420 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Add3Q9QYB5 706 aaKnown RBP13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Nckap5lQ6GQX2 1323 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Exoc6bA6H5Z3 810 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 NmiO35309 314 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Cyp2d11P24457 504 aa13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 HnrnpmQ9D0E1 729 aaKnown RBP13.6□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Edc3Q8K2D3 508 aaKnown RBP13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Cabp4Q8VHC5 271 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Tceal9Q9DD24 104 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Chd4Q6PDQ2 1915 aaKnown RBP13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Adamtsl3G3UXC7 1706 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Pa2g4P50580 394 aaKnown RBP13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Bcl2l13P59017 434 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Eya1P97767 591 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Arid5bQ8BM75 1188 aaKnown RBP13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Disp3A3KFU9 1347 aa13.59□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Lnx1O70263 728 aa13.58□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ier5O89113 308 aa13.58□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Top1mtQ8R4U6 593 aa13.58□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Q9D9S1 216 aa13.58□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ahdc1Q6PAL7 1594 aaKnown RBP13.58□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Jarid2Q62315 1234 aa13.58□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Kansl3A2RSY1 903 aaKnown RBP13.58□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Mctp1E9PV86 951 aa13.58□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Dync1i1O88485 628 aa13.58□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Tyro3P55144 880 aa13.58□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 IghaA0A0A6YXW6 389 aa13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Gm973E9Q295 1059 aa13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Psen1P49769 467 aa13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Esyt1Q3U7R1 1092 aaKnown RBP13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Evi5lH3BKQ3 813 aa13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Cfdp1O88271 295 aaKnown RBP13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 CrebrfQ8CDG5 640 aaKnown RBP13.57□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Dnajc2P54103 621 aaKnown RBP13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ap5z1Q3U829 807 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ice2Q3UZ18 988 aaKnown RBP13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ifit2Q64112 472 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 CltcQ68FD5 1675 aaKnown RBP13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Nap1l3Q794H2 544 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Tomm22Q9CPQ3 142 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 PzpQ61838 1495 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 TnmdQ9EP64 317 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Cnpy2Q9QXT0 182 aa13.56□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Irx2P81066 474 aa13.55□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Il1rapl2Q9ERS6 686 aa13.55□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Add2Q9QYB8 725 aa13.55□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Tgfb1i1Q62219 461 aa13.55□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Adamts7Q68SA9 1657 aa13.55□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Gm21190A0A0G2JGJ6 266 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Cdkn1cP49919 348 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 TrhQ62361 256 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Hmx1O70218 332 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 RdxP26043 583 aaKnown RBP13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Fkbp4P30416 458 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Polr3dQ91WD1 398 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 PdcQ9QW08 244 aa13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 AdnpQ9Z103 1108 aaKnown RBP13.54□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Mtx1P47802 317 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 TfrcQ62351 763 aaKnown RBP13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Tmem132eQ6IEE6 982 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Ccz1Q8C1Y8 480 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Lins1Q3U1D0 764 aa13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Mphosph10Q810V0 681 aaKnown RBP13.53□□□□□ -0.24
Prpf40b-208ENSMUST00000136980 Bicd2Q921C5 820 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 125.6 ms