RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Iqsec3Q3TES0 1195 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gadd45bP22339 160 aa13.27□□□□□ -0.28
Ift88-201ENSMUST00000122063 Anapc15P60007 132 aa13.27□□□□□ -0.28
Ift88-201ENSMUST00000122063 Fam228bQ497Q6 232 aa13.27□□□□□ -0.28
Ift88-201ENSMUST00000122063 Soga3Q6NZL0 945 aa13.27□□□□□ -0.28
Ift88-201ENSMUST00000122063 4933402E13RikQ9D4D2 429 aa13.27□□□□□ -0.28
Ift88-201ENSMUST00000122063 MecomP14404 1042 aa13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 Adora1Q60612 326 aa13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ints3Q7TPD0 1041 aaKnown RBP13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 Eif3bQ8JZQ9 803 aaKnown RBP13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 Taf5lQ91WQ5 589 aa13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 Phlpp1Q8CHE4 1687 aa13.27□□□□□ -0.29
Ift88-201ENSMUST00000122063 HellsQ60848 821 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Q8C5K5 320 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Trim44Q9QXA7 346 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 VgfQ0VGU4 617 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Tmx3Q8BXZ1 456 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Gli3Q61602 1583 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Fkbp5Q64378 456 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Dhx38Q80X98 1228 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 PtmsQ9D0J8 101 aaKnown RBP13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 LratQ9JI60 231 aa13.26□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ddx11Q6AXC6 880 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Tceanc2Q8R2M0 207 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Bag3Q9JLV1 577 aaKnown RBP13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ppfia1B2RXQ2 1266 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Clcn1Q64347 994 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Amigo3Q8C2S7 508 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Chmp3Q9CQ10 224 aa13.25□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ms4a2P20490 235 aa13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ppm1mQ8BU27 406 aa13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 Utp18Q5SSI6 552 aaKnown RBP13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 Sf3a1Q8K4Z5 791 aaKnown RBP13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 BcorQ8CGN4 1759 aa13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 AU015836B2RUM3 263 aa13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 Ifit2Q64112 472 aa13.24□□□□□ -0.29
Ift88-201ENSMUST00000122063 Gm45015A0A140LII9 184 aa13.23□□□□□ -0.29
Ift88-201ENSMUST00000122063 Gm18336A0A140LIU8 765 aa13.23□□□□□ -0.29
Ift88-201ENSMUST00000122063 Syce3B5KM66 88 aa13.23□□□□□ -0.29
Ift88-201ENSMUST00000122063 Babam1Q3UI43 333 aa13.23□□□□□ -0.29
Ift88-201ENSMUST00000122063 Elmsan1E9Q2I4 1089 aaKnown RBP13.22□□□□□ -0.29
Ift88-201ENSMUST00000122063 Mdm2P23804 489 aa13.22□□□□□ -0.29
Ift88-201ENSMUST00000122063 Flad1Q8R123 492 aa13.22□□□□□ -0.29
Ift88-201ENSMUST00000122063 Rnf123Q5XPI3 1314 aa13.22□□□□□ -0.29
Ift88-201ENSMUST00000122063 Wnk3Q80XP9 1757 aa13.22□□□□□ -0.29
Ift88-201ENSMUST00000122063 Tns2Q8CGB6 1400 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 MypnQ5DTJ9 1315 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Rbm8a2A0A0N4SUH6 174 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 HdgfP51859 237 aaKnown RBP13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Rnf214Q8BFU3 668 aaKnown RBP13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Cdca7lQ922M5 438 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Rbm8aQ9CWZ3 174 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Rufy3Q9D394 469 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Q9D9S1 216 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Syde2E9PUP1 1314 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Plekhd1B2RPU2 505 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Usp48Q3V0C5 1052 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Tti2Q8BGV4 512 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Smc3Q9CW03 1217 aaKnown RBP13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Erich6bQ9D4S6 220 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Sytl4Q9R0Q1 673 aa13.21□□□□□ -0.29
Ift88-201ENSMUST00000122063 Scn4aQ9ER60 1841 aa13.21□□□□□ -0.3
Ift88-201ENSMUST00000122063 ImpactO55091 318 aa13.21□□□□□ -0.3
Ift88-201ENSMUST00000122063 Strn4P58404 760 aa13.21□□□□□ -0.3
Ift88-201ENSMUST00000122063 Pde3bQ61409 1100 aa13.21□□□□□ -0.3
Ift88-201ENSMUST00000122063 Gm9992B2RWK3 458 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Hoxa7P02830 229 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ankle2Q6P1H6 964 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Unc93aQ710D3 458 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Rrs1Q9CYH6 365 aaKnown RBP13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Phf14Q9D4H9 881 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Mst1rQ62190 1378 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 EappQ5BU09 281 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Nlrp9bQ66X22 1003 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Bms1Q6PGF5 1284 aaKnown RBP13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Smim5Q8BT42 78 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 Rassf8Q8CJ96 419 aa13.2□□□□□ -0.3
Ift88-201ENSMUST00000122063 InsrrQ9WTL4 1300 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Col18a1P39061 1774 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ddx46Q569Z5 1032 aaKnown RBP13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Vps54Q5SPW0 977 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ddx19aQ61655 478 aaKnown RBP13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Isy1Q69ZQ2 285 aaKnown RBP13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Polr3dQ91WD1 398 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ak2Q9WTP6 239 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ddx60E9PZQ1 1711 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ddx58Q6Q899 926 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Kiaa0232Q80U59 1396 aaKnown RBP13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Pcmtd1P59913 357 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Igflr1Q3U4N7 345 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 BcanQ61361 883 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 DbnlQ62418 436 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Dis3l2Q8CI75 870 aaKnown RBP13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 4931400O07RikQ9D4M5 137 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ccdc7Q9D541 371 aa13.19□□□□□ -0.3
Ift88-201ENSMUST00000122063 Gnat3Q3V3I2 354 aa13.18□□□□□ -0.3
Ift88-201ENSMUST00000122063 Rbm27Q5SFM8 1060 aaKnown RBP13.18□□□□□ -0.3
Ift88-201ENSMUST00000122063 Ripor2Q80U16 1078 aa13.18□□□□□ -0.3
Ift88-201ENSMUST00000122063 Mad1l1Q9WTX8 717 aaKnown RBP13.18□□□□□ -0.3
Ift88-201ENSMUST00000122063 Zfp142G5E869 1843 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms