RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 MsnP26041 577 aaKnown RBP12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Fam83gQ5SWY7 812 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Siglec1Q62230 1695 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Bach1P97302 739 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Gimap5Q8BWF2 308 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Ppp1r42Q8R1Z4 357 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Utp3Q9JI13 469 aaKnown RBP12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Nphp1Q9QY53 687 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Tet3Q8BG87 1668 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Tnnt1O88346 262 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 EappQ5BU09 281 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Samm50Q8BGH2 469 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Glipr1l2Q9CQ35 332 aa12.92□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Cavin1O54724 392 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Mcm3P25206 812 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Anp32cQ64G17 123 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 LlphQ9D945 130 aaKnown RBP12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Zbtb22Q9Z0G7 638 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Bach2P97303 839 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Cwc27Q3TKY6 469 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Adgrb1Q3UHD1 1582 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Mmp14P53690 582 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Adcy5P84309 1262 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Slx4ipQ9D7Y9 413 aa12.91□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Ptpn23Q6PB44 1692 aa12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Wdr78E9PYY5 807 aa12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Atp6v1dP57746 247 aa12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 AnlnQ8K298 1121 aaKnown RBP12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Cbx1P83917 185 aaKnown RBP12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Pof1bQ8K4L4 587 aa12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Stk3Q9JI10 497 aa12.9□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Nid2O88322 1403 aa12.89□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Gm10471E9Q1C7 252 aa12.89□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 F2rP30558 430 aa12.89□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Bms1Q6PGF5 1284 aaKnown RBP12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 OptnQ8K3K8 584 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 DccP70211 1447 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Foxp4Q9DBY0 795 aaKnown RBP12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mmp8O70138 465 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Atp8b2P98199 1209 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Pdzrn3Q69ZS0 1063 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Rps6ka5Q8C050 863 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Themis2Q91YX0 663 aa12.88□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ptgs1P22437 602 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Rad17Q6NXW6 688 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Znf526Q8BI66 675 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 HypkQ9CR41 129 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Fam114a1Q9D281 569 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Igsf1Q7TQA1 1317 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Tpx2A2APB8 745 aaKnown RBP12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 CrklP47941 303 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Usp48Q3V0C5 1052 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Rbm42Q91V81 474 aaKnown RBP12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Pmfbp1Q9WVQ0 1022 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Abca15E9PWH4 1668 aa12.87□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Card10P58660 1021 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 KinQ8K339 391 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Cadps2Q8BYR5 1297 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Slit2Q9R1B9 1521 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Col15a1O35206 1367 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ahnak2E9PYB0 1738 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Rnf123Q5XPI3 1314 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ccdc173A0JLY1 547 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Elmsan1E9Q2I4 1089 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Hvcn1Q3U2S8 269 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Polr3gQ6NXY9 223 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Zranb3Q6NZP1 1069 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ppp1r37Q8BKR5 712 aa12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mad1l1Q9WTX8 717 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Hspa1lP16627 641 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ddx54Q8K4L0 874 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ccar2Q8VDP4 922 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mlh1Q9JK91 760 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Kdm6aO70546 1401 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Msh6P54276 1358 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Smarce1O54941 411 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 CgnP59242 1191 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 RgmbQ7TQ33 436 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Grpel1Q99LP6 217 aa12.85□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mcmdc2E9Q956 681 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Chpf2Q3UU43 768 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mx2Q9WVP9 655 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Vps37dQ810I0 261 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Nol8Q3UHX0 1147 aaKnown RBP12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Ncbp1Q3UYV9 790 aaKnown RBP12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Slc4a10Q5DTL9 1118 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Sf3a1Q8K4Z5 791 aaKnown RBP12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Mmel1Q9JLI3 765 aa12.84□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Stk36Q69ZM6 1316 aa12.83□□□□□ -0.35
Prpf40b-202ENSMUST00000118287 Atf5O70191 283 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Gjb2Q00977 226 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Trpm3Q5F4S9 1721 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Utp18Q5SSI6 552 aaKnown RBP12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Smc3Q9CW03 1217 aaKnown RBP12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Fam50bQ9WTJ8 334 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Psen1P49769 467 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Zfp51Q3U4L8 781 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Gsdma3Q5Y4Y6 464 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Snx13Q6PHS6 957 aa12.83□□□□□ -0.36
Prpf40b-202ENSMUST00000118287 Ccdc94Q9D6J3 314 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms