RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Ttll7A4Q9F0 912 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Olfr247E9PVJ7 320 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Olfr819K7N727 320 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Fhdc1Q3ULZ2 1149 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Dpf2Q61103 391 aaKnown RBP15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 U2surpQ6NV83 1029 aaKnown RBP15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Soga3Q6NZL0 945 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Atp2b4Q6Q477 1205 aa15.89■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Sipa1l3G3X9J0 1776 aa15.88■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 1700019A02RikA0A087WPV9 146 aa15.88■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Dbndd1Q9CZ00 160 aa15.88■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Senp3Q9EP97 568 aaKnown RBP15.88■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Kif13bA0A286YCV9 1847 aa15.88■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Golgb1E9PVZ8 3238 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 CfhP06909 1234 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Stra8P70278 393 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Gtpbp6Q3U6U5 514 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Adam1aQ60813 791 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Usp16Q99LG0 825 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Foxo3Q9WVH4 672 aa15.87■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Cnksr1A2A9K7 700 aa15.86■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Aknad1E9Q8N6 675 aa15.86■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Hsp90ab1P11499 724 aaKnown RBP15.86■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Susd4Q8BH32 490 aa15.86■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Cct4P80315 539 aaKnown RBP15.85■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Zbtb40Q6PCS8 1258 aa15.85■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Cdc37l1Q9CZP7 335 aa15.85■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Col24a1Q30D77 1733 aa15.85■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 BcorQ8CGN4 1759 aa15.85■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Atp6v0a2P15920 856 aa15.84■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 XpcP51612 930 aa15.84■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Map3k9Q3U1V8 1077 aa15.84■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Zfp831A2ADM8 1628 aa15.83■□□□□ 0.13
Ccdc28b-202ENSMUST00000106035 Mex3cQ05A36 652 aaKnown RBP15.83■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ttc5Q99LG4 440 aa15.83■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ptf1aQ9QX98 324 aa15.83■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Mrs2Q5NCE8 434 aa15.82■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Atxn2lQ7TQH0 1049 aaKnown RBP15.82■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Rbm5Q91YE7 815 aaKnown RBP15.82■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Setdb1O88974 1307 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Flt1P35969 1333 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ankib1Q6ZPS6 1085 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Rasgrp4Q8BTM9 673 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Stk32bQ9JJX8 414 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 UtrnE9Q6R7 3430 aa15.81■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Disp3A3KFU9 1347 aa15.8■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Zc3h15Q3TIV5 426 aaKnown RBP15.8■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 AbraQ8BUZ1 375 aa15.8■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Atxn3Q9CVD2 355 aa15.8■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Upf1Q9EPU0 1124 aaKnown RBP15.8■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ttc21aQ8C0S4 1314 aa15.79■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 CoilQ5SU73 570 aa15.79■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Vil1Q62468 827 aa15.79■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Insm1Q63ZV0 521 aa15.79■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 WaslQ91YD9 501 aa15.79■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Mtcl1Q3UHU5 1945 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ankrd50F7BE84 1390 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ttc41Q692V3 1318 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Hspa2P17156 633 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Eva1cP58659 440 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Rbm17Q8JZX4 405 aaKnown RBP15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Anks4bQ8K3X6 423 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ltb4r2Q9JJL9 360 aa15.78■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Sh3tc1G3X9F6 1346 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 AK157302I3ITR1 129 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Dok7Q18PE0 504 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Psd3Q2PFD7 1037 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Irf9Q61179 399 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Ralbp1Q62172 648 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Isca1Q9D924 129 aa15.77■□□□□ 0.12
Ccdc28b-202ENSMUST00000106035 Rbm25B2RY56 838 aaKnown RBP15.76■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 PgfP49764 158 aa15.76■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Pcsk7Q61139 770 aa15.76■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Rbm46P86049 533 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Stxbp5lQ5DQR4 1185 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 CrbnQ8C7D2 445 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Ppp1r3fQ9JIG4 799 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Foxo4Q9WVH3 505 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Scn9aQ62205 1984 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Flt4P35917 1363 aa15.75■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 MypnQ5DTJ9 1315 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 NudcO35685 332 aaKnown RBP15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Csf1rP09581 977 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Usp48Q3V0C5 1052 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Mak16Q8BGS0 296 aaKnown RBP15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Bicc1Q99MQ1 977 aaKnown RBP15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Ttc14Q9CSP9 761 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 UvssaQ9D479 717 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Speer4f1Q9D5Q6 258 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Echdc1Q9D9V3 322 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Cyp2ab1S4R196 498 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Znf609Q8BZ47 1413 aa15.74■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Slc4a2P13808 1237 aaKnown RBP15.73■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Cyp19a1P28649 503 aa15.73■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Lrch1P62046 709 aa15.73■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Sf3b3Q921M3 1217 aaKnown RBP15.73■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Ankrd31A0A140LI88 1765 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Arap2Q8BZ05 1703 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Myd88P22366 296 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Glg1Q61543 1175 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms