RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Sh3tc1G3X9F6 1346 aa11.96□□□□□ -0.49
Scn9a-201ENSMUST00000100063 DlatQ8BMF4 642 aa11.96□□□□□ -0.49
Scn9a-201ENSMUST00000100063 Tmem266Q8BZB3 538 aa11.96□□□□□ -0.49
Scn9a-201ENSMUST00000100063 Dzip1Q8BMD2 852 aa11.96□□□□□ -0.49
Scn9a-201ENSMUST00000100063 Slc27a3O88561 667 aa11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 NppbP40753 121 aa11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Sde2Q8K1J5 448 aaKnown RBP11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Kif11Q6P9P6 1052 aa11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ccdc158Q8CDI6 1109 aa11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Camsap2Q8C1B1 1461 aa11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 RtcbQ99LF4 505 aaKnown RBP11.96□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Gas8Q60779 478 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Smarcc2Q6PDG5 1213 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cbx1P83917 185 aaKnown RBP11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Atp2b4Q6Q477 1205 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 TprnA2AI08 749 aaKnown RBP11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ccdc170D3YXL0 722 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cnga2Q62398 664 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Dpp7Q9ET22 506 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Triml1Q8BVP1 470 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ccnl1Q52KE7 532 aaKnown RBP11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Zfp644E9QA22 1323 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Gapvd1Q6PAR5 1458 aa11.95□□□□□ -0.5
Scn9a-201ENSMUST00000100063 NinlQ6ZQ12 1394 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ampd3O08739 766 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ppfibp2O35711 882 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Akap2O54931 893 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ivns1abpQ920Q8 642 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Jakmip3Q5DTN8 844 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 4921504E06RikQ8CET2 560 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cog6Q8R3I3 657 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Krt15Q61414 452 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Olfml1Q8BSH2 233 aa11.94□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ankrd35E9Q9D8 996 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Trim55G3X8Y1 545 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cfap100Q80VN0 613 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Podxl2Q8CAE9 603 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Prpf40aQ9R1C7 953 aaKnown RBP11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Naa15Q80UM3 865 aaKnown RBP11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Mex3cQ05A36 652 aaKnown RBP11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Frmpd2A0A140LI67 1392 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Gigyf2Q6Y7W8 1291 aaKnown RBP11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Otud6bQ8K2H2 294 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Kif18aQ91WD7 886 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Haus2Q9CQS9 234 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Stoml1Q8CI66 399 aa11.93□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Tom1l2Q5SRX1 507 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ncapd3Q6ZQK0 1506 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Pkd2l2Q9JLG4 621 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Neo1P97798 1493 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Krt23Q99PS0 422 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ppip5k1A2ARP1 1436 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cavin1O54724 392 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Msl1Q6PDM1 616 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Trim25Q61510 634 aaKnown RBP11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Eif6O55135 245 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Kmt5bQ3U8K7 883 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Nacc1Q7TSZ8 514 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Letm1Q9Z2I0 738 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 TchpQ3TVW5 497 aa11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Wdr33Q8K4P0 1330 aaKnown RBP11.92□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Lrrc43Q3V0L5 667 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Map3k2Q61083 619 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Znf653Q6YND2 615 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Naip7Q9JIB3 1402 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Naip6Q9JIB6 1403 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 GabpaQ00422 454 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Eif3j1Q3UGC7 261 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Kif5bQ61768 963 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Eif3j2Q66JS6 263 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Erlin1Q91X78 346 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ccdc85cE9Q6B2 420 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Krt13P08730 437 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Calm1P0DP26 149 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Calm2P0DP27 149 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Calm3P0DP28 149 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 FerP70451 823 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Fam163aQ8CAA5 168 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ppp1r42Q8R1Z4 357 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Caskin1Q6P9K8 1431 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 ParnQ8VDG3 624 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ptcd1Q8C2E4 695 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Mcur1Q9CXD6 340 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Tbc1d2B1AVH7 922 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 GnaqP21279 359 aa11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Rbm17Q8JZX4 405 aaKnown RBP11.91□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Cfap65Q3V0B4 1847 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 E9QMW4 1145 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Metap2O08663 478 aaKnown RBP11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Sdc2P43407 202 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Pof1bQ8K4L4 587 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Pik3r4Q8VD65 1358 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 PtprkP35822 1457 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Sh2d4bA6X942 431 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Pus7B7ZNL8 666 aaKnown RBP11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Slc38a10Q5I012 1090 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Exoc3Q6KAR6 755 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 SfpqQ8VIJ6 699 aaKnown RBP11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 Ginm1Q91WR6 327 aa11.9□□□□□ -0.5
Scn9a-201ENSMUST00000100063 NrkQ9R0G8 1455 aa11.9□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms