RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Tspyl2Q7TQI8 677 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Ppm1eQ80TL0 749 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Ccdc150Q8CDI7 1110 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Grin2aP35436 1464 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Camsap2Q8C1B1 1461 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 SlmapQ3URD3 845 aa17.55■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Gm156Q58A37 223 aa17.54■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Camsap1A2AHC3 1581 aa17.54■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Smarcad1Q04692 1021 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Chmp6P0C0A3 200 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Tmem143Q8VD26 458 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Cep120Q7TSG1 988 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 MthfsQ9D110 203 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Znf394Q9Z1D9 521 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Metap2O08663 478 aaKnown RBP17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Tmc2Q8R4P4 888 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Kank1E9Q238 1360 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Zcwpw1Q6IR42 630 aa17.53■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Slc4a4O88343 1079 aa17.52■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Limch1Q3UH68 1057 aa17.52■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 Fam13bQ8K2H3 851 aa17.52■□□□□ 0.4
Ccdc50-203ENSMUST00000100026 DesP31001 469 aaKnown RBP17.52■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 NinlQ6ZQ12 1394 aa17.52■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Atp2b1G5E829 1220 aa17.52■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Mlh3A0A1Y7VMP7 1443 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Sdc2P43407 202 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 IntuQ059U7 942 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Cers3Q1A3B0 383 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Zap70P43404 618 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Dact3Q0PHV7 610 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Echdc1Q9D9V3 322 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Ppfia3P60469 1194 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Kmt5bQ3U8K7 883 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 HellsQ60848 821 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Ptcd1Q8C2E4 695 aaKnown RBP17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Prr29B1ARI9 187 aa17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Tax1bp1Q3UKC1 814 aaKnown RBP17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Luzp1Q8R4U7 1068 aaKnown RBP17.51■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Wdr33Q8K4P0 1330 aaKnown RBP17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Casp1P29452 402 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Trim25Q61510 634 aaKnown RBP17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Gle1Q8R322 699 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Fermt1P59113 677 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Zbtb22Q9Z0G7 638 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Larp6Q8BN59 492 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Cnga2Q62398 664 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Tmem87aQ8BXN9 555 aa17.5■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Ccdc158Q8CDI6 1109 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Lmbr1lQ9D1E5 489 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 WtapQ9ER69 396 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Taf7Q9R1C0 341 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Svs3aF2Z472 265 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Ampd3O08739 766 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Eme2Q56A04 373 aa17.49■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Q3UPC7 1272 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Krt25Q8VCW2 446 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 ParnQ8VDG3 624 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Atp2b3Q0VF55 1220 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Klhdc4Q921I2 584 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Hook3Q8BUK6 718 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Lmod1Q8BVA4 595 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Gjc1P28229 396 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Smarcc2Q6PDG5 1213 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Tmem266Q8BZB3 538 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Rapgef6Q5NCJ1 1609 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Qtrt2B8ZXI1 415 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Ttc12Q8BW49 704 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Dnajc10Q9DC23 793 aa17.48■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Pcf11G3X9Z4 1553 aa17.47■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 LyarQ08288 388 aaKnown RBP17.47■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Syce3B5KM66 88 aa17.47■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Calml4Q91WQ9 153 aa17.47■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Fam160b2Q80YR2 744 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Sp4Q62445 782 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Zranb1Q7M760 708 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Calm1P0DP26 149 aaKnown RBP17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Calm2P0DP27 149 aaKnown RBP17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Calm3P0DP28 149 aaKnown RBP17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 P4ha1Q60715 534 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Jakmip2D3YXK0 820 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Wwc1Q5SXA9 1104 aa17.46■□□□□ 0.39
Ccdc50-203ENSMUST00000100026 Sh3tc1G3X9F6 1346 aa17.46■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ssrp1Q08943 708 aaKnown RBP17.46■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Vps16Q920Q4 839 aa17.46■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Rnf187Q8BFX1 236 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Klhl10Q9D5V2 608 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Rbm17Q8JZX4 405 aaKnown RBP17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 AdnpQ9Z103 1108 aaKnown RBP17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Cnot6lQ8VEG6 555 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 GckrQ91X44 587 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Dennd3A2RT67 1274 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ssh1Q76I79 1042 aa17.45■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Spocd1B1ASB6 936 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ufl1Q8CCJ3 793 aaKnown RBP17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 DymQ8CHY3 669 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Vps36Q91XD6 386 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Mybbp1aQ7TPV4 1344 aaKnown RBP17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Hook2Q7TMK6 716 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Mrpl44Q9CY73 333 aaKnown RBP17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Pkd2l2Q9JLG4 621 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms