RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Krt23Q99PS0 422 aa16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Larp6Q8BN59 492 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Cetn1P41209 172 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Vps16Q920Q4 839 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 L1td1Q587J6 782 aaKnown RBP16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Zbtb3Q91X45 518 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Prpf40aQ9R1C7 953 aaKnown RBP16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Hmg20bQ9Z104 317 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Metap2O08663 478 aaKnown RBP16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 VeztQ3ZK22 780 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Cdan1Q8CC12 1239 aa16.03■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Atp2b1G5E829 1220 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Hand2Q61039 217 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Slc7a3P70423 618 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Cdca8Q8BHX3 289 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Klhl30Q8C3F7 581 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Hip1rQ9JKY5 1068 aa16.02■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Slc12a5Q91V14 1138 aa16.02■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Tbc1d8Q9Z1A9 1134 aa16.02■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Gm1043A0A140LJC2 1431 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Urb2E9Q7L1 1524 aaKnown RBP16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Map3k7clP58500 142 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Vgll3P85442 326 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ctage5Q8R311 779 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Gle1Q8R322 699 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Duxf3A0A0N4SV92 674 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Mnat1P51949 309 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ttc21aQ8C0S4 1314 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Catsper2A2ARP9 588 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ppfia1B2RXQ2 1266 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 E9QMW4 1145 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 TchpQ3TVW5 497 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 RragbQ6NTA4 374 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Soga3Q6NZL0 945 aa16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Mybbp1aQ7TPV4 1344 aaKnown RBP16.01■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Syt1P46096 421 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Specc1Q5SXY1 1067 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Paip2Q9D6V8 124 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ccdc141E9Q8Q6 1531 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Nkx1-2P42580 305 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Gbp1Q01514 589 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Tmem87bQ8BKU8 555 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ncoa1P70365 1447 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Dync1i1O88485 628 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ccdc42Q5SV66 316 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Irf9Q61179 399 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Zswim4Q8C7B8 1101 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Uchl5Q9WUP7 329 aa16■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ift88Q61371 824 aa15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ddx27Q921N6 760 aaKnown RBP15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Camsap1A2AHC3 1581 aa15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ripk4Q9ERK0 786 aa15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ssrp1Q08943 708 aaKnown RBP15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 U2af1l4Q8BGJ9 220 aa15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Naip2Q9QUK4 1447 aa15.99■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Nap1l2P51860 460 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ctdp1Q7TSG2 960 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Eif3j1Q3UGC7 261 aaKnown RBP15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Map3k2Q61083 619 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Eif3j2Q66JS6 263 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ano6Q6P9J9 911 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Yeats4Q9CR11 227 aaKnown RBP15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Rbm19Q8R3C6 952 aaKnown RBP15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Cul5Q9D5V5 780 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Dact3Q0PHV7 610 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ccdc155Q80VJ8 648 aa15.98■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Dnm1P39053 867 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Tyro3P55144 880 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Kmt5bQ3U8K7 883 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Chpf2Q3UU43 768 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Mrps27Q8BK72 415 aaKnown RBP15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Tubb4aQ9D6F9 444 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 SfpqQ8VIJ6 699 aaKnown RBP15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 PdiltQ9DAN1 588 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Tceanc2Q8R2M0 207 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ddx23D3Z0M9 819 aaKnown RBP15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ccdc148Q6P5U8 527 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Gramd4Q8CB44 633 aa15.97■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Gm10093D3YYI8 482 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Hdac1O09106 482 aaKnown RBP15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Matr3Q8K310 846 aaKnown RBP15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Pkd2l2Q9JLG4 621 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Cyp4f39Q8BGU0 532 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Fam163aQ8CAA5 168 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Hs2st1Q8R3H7 356 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Kcnh5Q920E3 988 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 FanclQ9CR14 375 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 AmfrQ9R049 643 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Sept6Q9R1T4 434 aa15.96■□□□□ 0.15
Col3a1-201ENSMUST00000087883 Ccne1Q61457 408 aa15.96■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Plcd3Q8K2J0 785 aa15.96■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Bloc1s4Q8VED2 215 aa15.96■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Slx4ipQ9D7Y9 413 aa15.96■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Wdr62Q3U3T8 1523 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gnat3Q3V3I2 354 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm21985Q6P6P5 1106 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sept14Q9DA97 430 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Polr3aB2RXC6 1390 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Speer4aF8VPX6 267 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Mcm10Q0VBD2 885 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms