RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Fam83gQ5SWY7 812 aa13.71□□□□□ -0.21
Trim23-203ENSMUST00000069187 MarsQ68FL6 902 aaKnown RBP13.71□□□□□ -0.21
Trim23-203ENSMUST00000069187 Asic4Q7TNS7 539 aa13.71□□□□□ -0.21
Trim23-203ENSMUST00000069187 AnlnQ8K298 1121 aaKnown RBP13.71□□□□□ -0.21
Trim23-203ENSMUST00000069187 Stk11ipQ3TAA7 1072 aa13.71□□□□□ -0.21
Trim23-203ENSMUST00000069187 Bcl9lQ67FY2 1494 aa13.71□□□□□ -0.22
Trim23-203ENSMUST00000069187 Pard3Q99NH2 1333 aa13.71□□□□□ -0.22
Trim23-203ENSMUST00000069187 Chl1P70232 1209 aa13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 LlphQ9D945 130 aaKnown RBP13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 Zkscan16A2ALW2 728 aa13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 Eif4a1P60843 406 aaKnown RBP13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 FanclQ9CR14 375 aa13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 Slit1Q80TR4 1531 aa13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 Smarce1O54941 411 aaKnown RBP13.7□□□□□ -0.22
Trim23-203ENSMUST00000069187 Cavin1O54724 392 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Dync1i1O88485 628 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Tpm3P21107 285 aaKnown RBP13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Aifm3Q3TY86 605 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Filip1lQ6P6L0 1131 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Gm973E9Q295 1059 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Casc1Q6TDU8 730 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Larp1Q6ZQ58 1072 aaKnown RBP13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Znf526Q8BI66 675 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Arfgef2A2A5R2 1792 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Bcl2l12Q9D3J3 255 aa13.69□□□□□ -0.22
Trim23-203ENSMUST00000069187 Atf5O70191 283 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 ApobrQ8VBT6 942 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Trpm3Q5F4S9 1721 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 MccE9PWI3 1003 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Anapc15P60007 132 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Fam13aQ8BGI4 693 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 GckrQ91X44 587 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Ahnak2E9PYB0 1738 aaKnown RBP13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Triml2E9PW10 424 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Nucb2P81117 420 aa13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Cbx1P83917 185 aaKnown RBP13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Nup153E9Q3G8 1462 aaKnown RBP13.68□□□□□ -0.22
Trim23-203ENSMUST00000069187 Klhl34A2AI76 644 aa13.67□□□□□ -0.22
Trim23-203ENSMUST00000069187 Vgll3P85442 326 aa13.67□□□□□ -0.22
Trim23-203ENSMUST00000069187 Psrc1Q9D0P7 329 aa13.67□□□□□ -0.22
Trim23-203ENSMUST00000069187 Exoc5Q3TPX4 708 aa13.67□□□□□ -0.22
Trim23-203ENSMUST00000069187 Cyp2d12Q8BVD2 504 aa13.67□□□□□ -0.22
Trim23-203ENSMUST00000069187 Adcy5P84309 1262 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Ddx19aQ61655 478 aaKnown RBP13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Cyp46a1Q9WVK8 500 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Mx2Q9WVP9 655 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Q9D2X8 372 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Taf7Q9R1C0 341 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Col1a2Q01149 1372 aa13.66□□□□□ -0.22
Trim23-203ENSMUST00000069187 Hoxa7P02830 229 aa13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Efcab2Q9CQ46 164 aa13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Atp2b3Q0VF55 1220 aa13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Ccnl1Q52KE7 532 aaKnown RBP13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Kank4Q6P9J5 1016 aa13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Emilin2Q8K482 1074 aa13.65□□□□□ -0.22
Trim23-203ENSMUST00000069187 Smg7Q5RJH6 1138 aaKnown RBP13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Pm20d1Q8C165 503 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 KinQ8K339 391 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Flad1Q8R123 492 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ginm1Q91WR6 327 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ssfa2Q922B9 1252 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Sass6Q80UK7 654 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Rbm42Q91V81 474 aaKnown RBP13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Med4Q9CQA5 270 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Abca15E9PWH4 1668 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Cspp1B2RX88 1205 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Trim30aP15533 496 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Strn4P58404 760 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Zfp51Q3U4L8 781 aa13.64□□□□□ -0.23
Trim23-203ENSMUST00000069187 Cnksr1A2A9K7 700 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Zkscan2G3X952 960 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ccar2Q8VDP4 922 aaKnown RBP13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Exoc6bA6H5Z3 810 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Nkx2-3P97334 362 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Nol8Q3UHX0 1147 aaKnown RBP13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 CtifQ6PEE2 600 aaKnown RBP13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Eno4Q8C042 619 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Cfdp1O88271 295 aaKnown RBP13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Sik1Q60670 779 aa13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Mphosph10Q810V0 681 aaKnown RBP13.63□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ccdc162pQ0VG85 912 aa13.62□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ccdc7Q9D541 371 aa13.62□□□□□ -0.23
Trim23-203ENSMUST00000069187 Echdc1Q9D9V3 322 aa13.62□□□□□ -0.23
Trim23-203ENSMUST00000069187 Atg4a-psA0A0G2JFS9 396 aa13.62□□□□□ -0.23
Trim23-203ENSMUST00000069187 Atg4aQ8C9S8 396 aa13.62□□□□□ -0.23
Trim23-203ENSMUST00000069187 Wdr93Q402B2 695 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 Prkar2bP31324 416 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ddb1Q3U1J4 1140 aaKnown RBP13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 SympkQ80X82 1284 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ube2hP62257 183 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 Mum1Q6DID5 682 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 Oxsr1Q6P9R2 527 aa13.61□□□□□ -0.23
Trim23-203ENSMUST00000069187 RdxP26043 583 aaKnown RBP13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Cdkn1cP49919 348 aa13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Ccdc129Q14B48 1034 aa13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Prkab2Q6PAM0 271 aa13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 CoilQ5SU73 570 aa13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Phf23Q8BSN5 401 aa13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Noc3lQ8VI84 807 aaKnown RBP13.6□□□□□ -0.23
Trim23-203ENSMUST00000069187 Smarca5Q91ZW3 1051 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 155.4 ms