RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Ubr3Q5U430 1889 aa14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Trim66Q924W6 1242 aa14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Nkx2-3P97334 362 aa14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Larp1Q6ZQ58 1072 aaKnown RBP14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Sgsm1Q8BPQ7 1093 aa14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Fam50bQ9WTJ8 334 aa14.65□□□□□ -0.06
Upk3b-201ENSMUST00000062606 Cdc37l1Q9CZP7 335 aa14.64□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Erich6bQ9D4S6 220 aa14.64□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Spata31d1bE9QA57 1361 aa14.64□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.64□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Arhgap33Q80YF9 1305 aa14.64□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Iqsec3Q3TES0 1195 aa14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Psmd1Q3TXS7 953 aa14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Pdcl2Q78Y63 240 aa14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Ccdc6D3YZP9 469 aa14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Rps6ka5Q8C050 863 aa14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 CoblQ5NBX1 1337 aaKnown RBP14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Eif4a1P60843 406 aaKnown RBP14.63□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Vsig10D3YX43 558 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Rabep1O35551 862 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Map7O88735 730 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 CastP51125 788 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gzf1Q4VBD9 706 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 VirmaA2AIV2 1811 aaKnown RBP14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Anapc15-psA0A140T8L6 141 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Isy1Q69ZQ2 285 aaKnown RBP14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 MetP16056 1379 aa14.62□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Becn1O88597 448 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Lrit1Q8K099 624 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gm21663A0A0G2JE01 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gm7361D3Z6R1 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 5031410I06RikE9Q4E0 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gm1979E9QAN3 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gm5862K7N5V5 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Gm10220K7N660 267 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Hdac6Q9Z2V5 1149 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Kiaa0319lQ8K135 1048 aa14.61□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Cnksr1A2A9K7 700 aa14.6□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Plcb2A3KGF7 1181 aa14.6□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Ccdc38Q8CDN8 563 aa14.6□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Ccar1Q8CH18 1146 aaKnown RBP14.6□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Tspyl2Q7TQI8 677 aa14.59□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Vars2Q3U2A8 1060 aa14.59□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Trerf1Q8BXJ2 1205 aa14.59□□□□□ -0.07
Upk3b-201ENSMUST00000062606 KarsQ99MN1 595 aaKnown RBP14.58□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Atg3Q9CPX6 314 aa14.58□□□□□ -0.07
Upk3b-201ENSMUST00000062606 Apba2P98084 750 aa14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Pde4dQ01063 747 aa14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Btbd11Q6GQW0 1109 aa14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Taf7Q9R1C0 341 aa14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Rbm25B2RY56 838 aaKnown RBP14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Chl1P70232 1209 aa14.58□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Catsper2A2ARP9 588 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ppfibp2O35711 882 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Atxn3Q9CVD2 355 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Phrf1A6H619 1682 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Wdr78E9PYY5 807 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 GalcP54818 684 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Zbtb12Q9Z150 459 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Vamp4O70480 141 aa14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 MarsQ68FL6 902 aaKnown RBP14.57□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Jmjd4Q8BFT6 427 aa14.56□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Snap23O09044 210 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 NmiO35309 314 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 AppP12023 770 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Tbc1d32Q3URV1 1296 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ccnl1Q52KE7 532 aaKnown RBP14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 ApobrQ8VBT6 942 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Vps37dQ810I0 261 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Sugp2Q8CH09 1067 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Mrc1Q61830 1456 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ppp2r3aB2RXC8 1150 aa14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Pdia6Q922R8 440 aaKnown RBP14.55□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ddx46Q569Z5 1032 aaKnown RBP14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 PsapQ61207 557 aaKnown RBP14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Flt4P35917 1363 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Greb1lB9EJV3 1913 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Prim1P20664 417 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Kiaa0319Q5SZV5 1081 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Trim52Q8CDV4 233 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Efcab2Q9CQ46 164 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ank1Q02357 1862 aa14.54□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ppm1eQ80TL0 749 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Cyp2d12Q8BVD2 504 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Akt1s1Q9D1F4 257 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Dpf1Q9QX66 387 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Col11a2Q64739 1736 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Map2k1P31938 393 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Nectin2P32507 530 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Slc20a2Q80UP8 656 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Paf1Q8K2T8 535 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Rgs17Q9QZB0 210 aa14.53□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Gm973E9Q295 1059 aa14.52□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Pnma3Q8JZW8 466 aa14.52□□□□□ -0.08
Upk3b-201ENSMUST00000062606 Ca8P28651 291 aa14.52□□□□□ -0.09
Upk3b-201ENSMUST00000062606 NcapgE9PWG6 1004 aa14.52□□□□□ -0.09
Upk3b-201ENSMUST00000062606 Terf2O35144 541 aa14.52□□□□□ -0.09
Upk3b-201ENSMUST00000062606 Flad1Q8R123 492 aa14.52□□□□□ -0.09
Upk3b-201ENSMUST00000062606 Col4a1P02463 1669 aa14.51□□□□□ -0.09
Upk3b-201ENSMUST00000062606 U2af2P26369 475 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms