RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Cfap70D3YVL2 1141 aa23.43■■□□□ 1.34
Vti1b-201ENSMUST00000055262 CltaO08585 235 aa23.43■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Dctn1O08788 1281 aa23.43■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Zc3h12cQ5DTV4 884 aa23.43■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Ankib1Q6ZPS6 1085 aa23.43■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Tgfb2P27090 414 aa23.42■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Map3k2Q61083 619 aa23.42■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Bicc1Q99MQ1 977 aaKnown RBP23.42■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Pde4bB1AWC9 736 aa23.41■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Kcna3P16390 528 aa23.41■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Gimap8Q75N62 688 aa23.4■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Ambra1A2AH22 1300 aa23.39■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Npy5rO70342 466 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Fkbp1aP26883 108 aaKnown RBP23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 HellsQ60848 821 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Ppm1mQ8BU27 406 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Znf330Q922H9 316 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Dbndd1Q9CZ00 160 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Taf1dQ9D4V4 322 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Kcnn1Q9EQR3 537 aa23.38■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Ltb4r2Q9JJL9 360 aa23.37■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Duox1A2AQ92 1551 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Exoc6bA6H5Z3 810 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Ank1Q02357 1862 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Rtkn2Q14B46 604 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 MypnQ5DTJ9 1315 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Ddx58Q6Q899 926 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Susd4Q8BH32 490 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Pank1Q8K4K6 548 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 St5Q924W7 1134 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Kif13bA0A286YCV9 1847 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Casz1Q9CWL2 1761 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 IarsQ8BU30 1262 aa23.36■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Bend3Q6PAL0 825 aa23.35■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Maco1Q7TQE6 664 aaKnown RBP23.35■■□□□ 1.33
Vti1b-201ENSMUST00000055262 AbraQ8BUZ1 375 aa23.35■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Tango6Q8C3S2 1079 aa23.35■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Q8C6G1 249 aa23.35■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Nutm1Q8BHP2 1126 aa23.34■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Camkk2Q8C078 588 aa23.34■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Ppp1r3fQ9JIG4 799 aa23.34■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Lmnb1P14733 588 aaKnown RBP23.33■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Myd88P22366 296 aa23.33■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Fkbp5Q64378 456 aa23.33■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Rnaseh2aQ9CWY8 301 aa23.33■■□□□ 1.33
Vti1b-201ENSMUST00000055262 Arap2Q8BZ05 1703 aa23.33■■□□□ 1.32
Vti1b-201ENSMUST00000055262 AK157302I3ITR1 129 aa23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Mphosph10Q810V0 681 aaKnown RBP23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Isca1Q9D924 129 aa23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Tnnt3Q9QZ47 272 aa23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Ankrd31A0A140LI88 1765 aa23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Col4a5Q63ZW6 1691 aa23.32■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Gja5Q01231 358 aa23.31■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Cyp2c69E9PXC3 491 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Hsp90ab1P11499 724 aaKnown RBP23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Cyp2c40P56657 491 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 MvpQ9EQK5 861 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Ankrd44B2RXR6 993 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Phf23Q8BSN5 401 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Foxo3Q9WVH4 672 aa23.3■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Frmpd3A0A140LIW3 1774 aa23.29■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Zap70P43404 618 aa23.29■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Ciapin1Q8WTY4 309 aa23.28■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Rbm5Q91YE7 815 aaKnown RBP23.28■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Ehd4Q9EQP2 541 aa23.28■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Cfdp1O88271 295 aaKnown RBP23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Aldh1l2Q8K009 923 aa23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Sgip1Q8VD37 806 aa23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Chmp4bQ9D8B3 224 aaKnown RBP23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Cwc25Q9DBF7 416 aa23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Mrc1Q61830 1456 aa23.27■■□□□ 1.32
Vti1b-201ENSMUST00000055262 Eif3aP23116 1344 aaKnown RBP23.27■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Cct4P80315 539 aaKnown RBP23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 EgfrQ01279 1210 aa23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 ArsiQ32KI9 573 aa23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 TrhQ62361 256 aa23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Soga3Q6NZL0 945 aa23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Stard3nlQ9DCI3 235 aa23.26■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Igflr1Q3U4N7 345 aa23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Ripor2Q80U16 1078 aa23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 GptQ8QZR5 496 aa23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Lmbr1lQ9D1E5 489 aa23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Mbd3Q9Z2D8 285 aaKnown RBP23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Znf521Q6KAS7 1311 aa23.25■■□□□ 1.31
Vti1b-201ENSMUST00000055262 NmiO35309 314 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Cyp19a1P28649 503 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 CanxP35564 591 aaKnown RBP23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Zcwpw1Q6IR42 630 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Eva1cP58659 440 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Strip1Q8C079 837 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 SnrkQ8VDU5 748 aa23.24■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Itgb4A2A863 1818 aa23.23■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Rnf180Q3U827 592 aa23.23■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Gpr162Q3UN16 588 aa23.23■■□□□ 1.31
Vti1b-201ENSMUST00000055262 FktnQ8R507 461 aa23.23■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Foxo4Q9WVH3 505 aa23.23■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Grm8P47743 908 aa23.22■■□□□ 1.31
Vti1b-201ENSMUST00000055262 B4galnt4Q766D5 1034 aa23.22■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Cops6O88545 324 aa23.21■■□□□ 1.31
Vti1b-201ENSMUST00000055262 Atxn2lQ7TQH0 1049 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms