RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Pdcl2Q78Y63 240 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 SnrkQ8VDU5 748 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Phkg2Q9DB30 406 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Col22a1E9Q7P1 1613 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 FocadA2AKG8 1798 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ifit2Q64112 472 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Rhot2Q8JZN7 620 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 OptnQ8K3K8 584 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Chmp7Q8R1T1 451 aa16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ccar2Q8VDP4 922 aaKnown RBP16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Pdia6Q922R8 440 aaKnown RBP16.75■□□□□ 0.27
Lime1-201ENSMUST00000048077 Kcnb2A6H8H5 907 aa16.74■□□□□ 0.27
Lime1-201ENSMUST00000048077 Rufy3Q9D394 469 aa16.74■□□□□ 0.27
Lime1-201ENSMUST00000048077 Syce3B5KM66 88 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Vsig10D3YX43 558 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Pa2g4P50580 394 aaKnown RBP16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Card10P58660 1021 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Wdr93Q402B2 695 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Col18a1P39061 1774 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Syt1P46096 421 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 CrklP47941 303 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Bcl2l13P59017 434 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Tbc1d30Q69ZT9 766 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Sgsm2Q80U12 1005 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Tti2Q8BGV4 512 aa16.73■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ubxn10Q8BG34 277 aa16.72■□□□□ 0.27
Lime1-201ENSMUST00000048077 TefQ9JLC6 301 aa16.72■□□□□ 0.27
Lime1-201ENSMUST00000048077 EspnlQ3UYR4 1005 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ccdc155Q80VJ8 648 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Dixdc1Q80Y83 711 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ssfa2Q922B9 1252 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Smc3Q9CW03 1217 aaKnown RBP16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Lmbr1lQ9D1E5 489 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Q9D9S1 216 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Stx6Q9JKK1 255 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Nlrp9bQ66X22 1003 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Dmrt2Q8BG36 561 aa16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 SrrtQ99MR6 875 aaKnown RBP16.71■□□□□ 0.27
Lime1-201ENSMUST00000048077 Cpa2Q504N0 417 aa16.7■□□□□ 0.26
Lime1-201ENSMUST00000048077 Bag3Q9JLV1 577 aaKnown RBP16.7■□□□□ 0.26
Lime1-201ENSMUST00000048077 Slit1Q80TR4 1531 aa16.7■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ric1Q69ZJ7 1422 aa16.7■□□□□ 0.26
Lime1-201ENSMUST00000048077 Bcl9lQ67FY2 1494 aa16.7■□□□□ 0.26
Lime1-201ENSMUST00000048077 Pof1bQ8K4L4 587 aa16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Fam184aE9PW83 1143 aa16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Dhx16G3X8X0 1044 aaKnown RBP16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Tmem87bQ8BKU8 555 aa16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Chmp4cQ9D7F7 232 aa16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Zfp804bA0A0G2JGH6 1343 aa16.69■□□□□ 0.26
Lime1-201ENSMUST00000048077 Gm21698A0A087WQP8 267 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Gm21671G3UY31 267 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Slc26a8Q8R0C3 999 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ak2Q9WTP6 239 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Psma5Q9Z2U1 241 aaKnown RBP16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Rbm8a2A0A0N4SUH6 174 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ube2hP62257 183 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 4930572O03RikQ8C5Y0 211 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Med4Q9CQA5 270 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Rbm8aQ9CWZ3 174 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Rcan3Q9JKK0 239 aa16.68■□□□□ 0.26
Lime1-201ENSMUST00000048077 Rnf20Q5DTM8 973 aa16.67■□□□□ 0.26
Lime1-201ENSMUST00000048077 Atf7Q8R0S1 413 aa16.67■□□□□ 0.26
Lime1-201ENSMUST00000048077 InsrrQ9WTL4 1300 aa16.67■□□□□ 0.26
Lime1-201ENSMUST00000048077 Tubb6Q922F4 447 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Erich6bQ9D4S6 220 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 PhaxQ9JJT9 385 aaKnown RBP16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Hmg20bQ9Z104 317 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ccdc173A0JLY1 547 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 RubcnlQ3TD16 648 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ankle2Q6P1H6 964 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Bms1Q6PGF5 1284 aaKnown RBP16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ripor2Q80U16 1078 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ush1cQ9ES64 910 aa16.66■□□□□ 0.26
Lime1-201ENSMUST00000048077 Cnnm1Q0GA42 951 aa16.65■□□□□ 0.26
Lime1-201ENSMUST00000048077 Zranb3Q6NZP1 1069 aa16.65■□□□□ 0.26
Lime1-201ENSMUST00000048077 Ddx58Q6Q899 926 aa16.65■□□□□ 0.26
Lime1-201ENSMUST00000048077 Aox1O54754 1333 aa16.65■□□□□ 0.26
Lime1-201ENSMUST00000048077 MypnQ5DTJ9 1315 aa16.65■□□□□ 0.26
Lime1-201ENSMUST00000048077 Zscan25B2RX31 543 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Evi5lH3BKQ3 813 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 GnpatP98192 678 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Clcn1Q64347 994 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Casc1Q6TDU8 730 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Asic4Q7TNS7 539 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Ccdc178Q8CDV0 866 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Eif3bQ8JZQ9 803 aaKnown RBP16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 NaspQ99MD9 773 aaKnown RBP16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Fbxl16A2RT62 479 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Eef2kO08796 724 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Igfbp6P47880 238 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Edc3Q8K2D3 508 aaKnown RBP16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Cdca7lQ922M5 438 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Erbb4Q61527 1308 aa16.64■□□□□ 0.25
Lime1-201ENSMUST00000048077 Ets1P27577 440 aa16.63■□□□□ 0.25
Lime1-201ENSMUST00000048077 Atf3Q60765 181 aa16.63■□□□□ 0.25
Lime1-201ENSMUST00000048077 Il1rapl2Q9ERS6 686 aa16.63■□□□□ 0.25
Lime1-201ENSMUST00000048077 Abca15E9PWH4 1668 aa16.62■□□□□ 0.25
Lime1-201ENSMUST00000048077 Becn1O88597 448 aa16.62■□□□□ 0.25
Lime1-201ENSMUST00000048077 MecomP14404 1042 aa16.62■□□□□ 0.25
Lime1-201ENSMUST00000048077 Tpm2P58774 284 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms