RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Tgfb2P27090 414 aa13.81□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Smarcc1P97496 1104 aa13.81□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Frmpd3A0A140LIW3 1774 aa13.81□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Dlg5E9Q9R9 1921 aa13.81□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Kdm4cQ8VCD7 1054 aa13.81□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Catsper2A2ARP9 588 aa13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Aldh8a1Q8BH00 487 aa13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Emilin1Q99K41 1017 aa13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Gm13023A2A8N2 498 aa13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Wdr63B2RY71 923 aa13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 MarsQ68FL6 902 aaKnown RBP13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 HnrnpuQ8VEK3 800 aaKnown RBP13.8□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Mcm4P49717 862 aa13.79□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Cog6Q8R3I3 657 aa13.79□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Mcm2P97310 904 aa13.79□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Smg7Q5RJH6 1138 aaKnown RBP13.79□□□□□ -0.2
Ckap2-201ENSMUST00000046916 RtcbQ99LF4 505 aaKnown RBP13.79□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Rsph3aQ3UFY4 516 aa13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Prom2Q3UUY6 835 aa13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Anapc15-psA0A140T8L6 141 aa13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Ssh1Q76I79 1042 aa13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Efcab2Q9CQ46 164 aa13.78□□□□□ -0.2
Ckap2-201ENSMUST00000046916 Gcc1Q9D4H2 778 aa13.77□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Cap2Q9CYT6 476 aa13.77□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Ubn2Q80WC1 1314 aa13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Prdm11A2AGX3 565 aa13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Rbm26Q6NZN0 1012 aaKnown RBP13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Rtf1A2AQ19 715 aaKnown RBP13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Magea6O89010 325 aa13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Magea3Q6T340 320 aa13.76□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Trim27Q62158 513 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 1700010I14RikQ7TPG0 532 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Amhr2Q8K592 568 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 CenppQ9CZ92 286 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 CarsQ9ER72 831 aaKnown RBP13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Znf609Q8BZ47 1413 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Col1a2Q01149 1372 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Bicdl1A0JNT9 577 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 HmcesQ8R1M0 353 aaKnown RBP13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Znf330Q922H9 316 aa13.75□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Iqsec3Q3TES0 1195 aa13.74□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Megf6Q80V70 1572 aa13.74□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Ubxn2bQ0KL01 331 aa13.74□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Thrap3Q569Z6 951 aaKnown RBP13.74□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Flad1Q8R123 492 aa13.74□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Hoxa7P02830 229 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Eif4g2Q62448 906 aaKnown RBP13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Hirip3Q8BLH7 601 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Tm6sf1P58749 370 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Nkx2-3P97334 362 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Mcm10Q0VBD2 885 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Tmco5bQ80X59 307 aa13.73□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Tbc1d9Q3UYK3 1264 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Tango6Q8C3S2 1079 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Sumf1Q8R0F3 372 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Tmem119Q8R138 280 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Gigyf1Q99MR1 1044 aaKnown RBP13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Rnf123Q5XPI3 1314 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Arap2Q8BZ05 1703 aa13.72□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Ddit3P35639 168 aa13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Gm12185Q5NCB2 835 aa13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Usp16Q99LG0 825 aa13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Nsfl1cQ9CZ44 370 aaKnown RBP13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Cabp2Q9JLK4 216 aa13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Duox1A2AQ92 1551 aa13.71□□□□□ -0.21
Ckap2-201ENSMUST00000046916 Btbd11Q6GQW0 1109 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Phf23Q8BSN5 401 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 SnrkQ8VDU5 748 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Foxp4Q9DBY0 795 aaKnown RBP13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Col4a5Q63ZW6 1691 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Plcb2A3KGF7 1181 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Nectin2P32507 530 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Wdhd1P59328 1117 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Chl1P70232 1209 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 TefQ9JLC6 301 aa13.7□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Nutm1Q8BHP2 1126 aa13.69□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Phrf1A6H619 1682 aa13.69□□□□□ -0.22
Ckap2-201ENSMUST00000046916 SlkO54988 1233 aa13.69□□□□□ -0.22
Ckap2-201ENSMUST00000046916 SowahdQ8BY98 327 aa13.69□□□□□ -0.22
Ckap2-201ENSMUST00000046916 PogkQ80TC5 607 aa13.68□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Ric3Q8BPM6 367 aa13.68□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Taf7Q9R1C0 341 aa13.68□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Adgre1Q61549 931 aa13.68□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Miga2Q8BK03 593 aa13.67□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Trim52Q8CDV4 233 aa13.67□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Nek4Q9Z1J2 792 aa13.67□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Camkk2Q8C078 588 aa13.67□□□□□ -0.22
Ckap2-201ENSMUST00000046916 PtmsQ9D0J8 101 aaKnown RBP13.67□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Rfx1P48377 963 aa13.66□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Eif4a1P60843 406 aaKnown RBP13.66□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Ccdc155Q80VJ8 648 aa13.66□□□□□ -0.22
Ckap2-201ENSMUST00000046916 EngaseQ8BX80 734 aa13.66□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Zfp831A2ADM8 1628 aa13.65□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Casq1O09165 405 aa13.65□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Zfp646Q6NV66 1788 aa13.65□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Fkbp1aP26883 108 aaKnown RBP13.65□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Rapgef4Q9EQZ6 1011 aa13.65□□□□□ -0.22
Ckap2-201ENSMUST00000046916 Rangap1P46061 589 aaKnown RBP13.64□□□□□ -0.23
Ckap2-201ENSMUST00000046916 Rad23bP54728 416 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms