RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Arhgef1Q61210 920 aaKnown RBP16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 Polr3gQ6NXY9 223 aa16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 Bend3Q6PAL0 825 aa16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 Nfe2l3Q9WTM4 660 aa16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 Nphp3Q7TNH6 1325 aa16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 Atp2b3Q0VF55 1220 aa16.05■□□□□ 0.16
Nup88-201ENSMUST00000035283 CgnP59242 1191 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Trpm3Q5F4S9 1721 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 N4bp2F8VQG7 1678 aaKnown RBP16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Fyb1O35601 819 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Cnnm3Q32NY4 713 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Edc3Q8K2D3 508 aaKnown RBP16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Taf5lQ91WQ5 589 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Ndufa8Q9DCJ5 172 aa16.04■□□□□ 0.16
Nup88-201ENSMUST00000035283 Zkscan7E9PVW1 718 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Zfp251Q6PCX8 632 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Mphosph10Q810V0 681 aaKnown RBP16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Tbc1d8Q9Z1A9 1134 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Cnksr1A2A9K7 700 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Kcnb2A6H8H5 907 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Ahnak2E9PYB0 1738 aaKnown RBP16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Lmod3E9QA62 571 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Evi5lH3BKQ3 813 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Fkbp4P30416 458 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Tnnt2P50752 301 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Nucb2P81117 420 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Sgsm2Q80U12 1005 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Irx4Q9QY61 515 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Igbp1bQ9QZ29 343 aa16.03■□□□□ 0.16
Nup88-201ENSMUST00000035283 Ccdc162pQ0VG85 912 aa16.02■□□□□ 0.16
Nup88-201ENSMUST00000035283 Esyt1Q3U7R1 1092 aaKnown RBP16.02■□□□□ 0.16
Nup88-201ENSMUST00000035283 Cchcr1Q8K2I2 770 aa16.02■□□□□ 0.16
Nup88-201ENSMUST00000035283 Bcl2l13P59017 434 aa16.02■□□□□ 0.15
Nup88-201ENSMUST00000035283 PdcQ9QW08 244 aa16.02■□□□□ 0.15
Nup88-201ENSMUST00000035283 RictorQ6QI06 1708 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Rbm8a2A0A0N4SUH6 174 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Hoxa7P02830 229 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Eif4a1P60843 406 aaKnown RBP16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 NaspQ99MD9 773 aaKnown RBP16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Rbm8aQ9CWZ3 174 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Eef2kO08796 724 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Zfp113Q8C689 439 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Amotl2Q8K371 772 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Nrbp1Q99J45 535 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ak2Q9WTP6 239 aa16.01■□□□□ 0.15
Nup88-201ENSMUST00000035283 Col16a1Q8BLX7 1580 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Tyro3P55144 880 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Adcy9P51830 1353 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Trim30aP15533 496 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Nkx2-3P97334 362 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Leo1Q5XJE5 667 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Kiaa0753Q6A000 959 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Nap1l3Q794H2 544 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Sass6Q80UK7 654 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Il1rapl2Q9ERS6 686 aa16■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ptpn23Q6PB44 1692 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ugt1a5B2RT14 529 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Oas2E9Q9A9 742 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Tpd52l1O54818 204 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Atg3Q9CPX6 314 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Echdc1Q9D9V3 322 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Slit3Q9WVB4 1523 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Gm45140A0A0N4SUM8 220 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ets1P27577 440 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Cfap157Q0VFX2 523 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Sp8Q8BMJ8 486 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Polr3dQ91WD1 398 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 Zbtb3Q91X45 518 aa15.99■□□□□ 0.15
Nup88-201ENSMUST00000035283 1700006A11RikB9EHI3 544 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Hmx1O70218 332 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ddx11Q6AXC6 880 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Rab3gap1Q80UJ7 981 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Dmrt2Q8BG36 561 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Slc35g1Q8BY79 368 aa15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Wdr33Q8K4P0 1330 aaKnown RBP15.98■□□□□ 0.15
Nup88-201ENSMUST00000035283 Lnx1O70263 728 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 Lins1Q3U1D0 764 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 Abcc4E9Q236 1325 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 Abcc10Q8R4P9 1501 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 U2af2P26369 475 aaKnown RBP15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 Map3k2Q61083 619 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 PtprvP70289 1705 aa15.97■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ano6Q6P9J9 911 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Me3Q8BMF3 604 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 TnmdQ9EP64 317 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Fmnl2A2APV2 1086 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Kansl3A2RSY1 903 aaKnown RBP15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Cspp1B2RX88 1205 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Gm973E9Q295 1059 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 FanccP50652 591 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Ubxn10Q8BG34 277 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 SnrkQ8VDU5 748 aa15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Rreb1Q3UH06 1700 aaKnown RBP15.96■□□□□ 0.15
Nup88-201ENSMUST00000035283 Klhl34A2AI76 644 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Mctp1E9PV86 951 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Dnajc14Q921R4 703 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Gm10563F6WIE4 79 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Mdm2P23804 489 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Kiaa0754Q69ZZ9 979 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 4930504O13RikQ8C5Z9 145 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms