RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Atf7Q8R0S1 413 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Bag3Q9JLV1 577 aaKnown RBP13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Uggt2E9Q4X2 1504 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Snw1Q9CSN1 536 aaKnown RBP13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Kcnf1Q7TSH7 493 aa13.27□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Nphp3Q7TNH6 1325 aa13.27□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Kank4Q6P9J5 1016 aa13.27□□□□□ -0.28
Topbp1-201ENSMUST00000035164 PhaxQ9JJT9 385 aaKnown RBP13.27□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Zfp804bA0A0G2JGH6 1343 aa13.27□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Map3k2Q61083 619 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Btbd11Q6GQW0 1109 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Spata31d1bE9QA57 1361 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Zkscan4Q5SZT6 480 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Tmco3Q8BH01 678 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Mrpl50Q8VDT9 159 aaKnown RBP13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Iqsec2Q5DU25 1478 aa13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Prrc2bQ7TPM1 1486 aaKnown RBP13.27□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Lnx1O70263 728 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Znf326O88291 580 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Stat1P42225 749 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ddx46Q569Z5 1032 aaKnown RBP13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ccdc155Q80VJ8 648 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ano10Q8BH79 659 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Larp6Q8BN59 492 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Srgap1Q91Z69 1062 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Cfap74Q3UY96 1578 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Elf2Q9JHC9 593 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Mrps25Q9D125 171 aaKnown RBP13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Leo1Q5XJE5 667 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Nlrp3Q8R4B8 1033 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Dnajc14Q921R4 703 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 MyclP10166 368 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Amotl2Q8K371 772 aa13.26□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ets1P27577 440 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Rbm33Q9CXK9 1231 aaKnown RBP13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Samsn1P57725 372 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 PsapQ61207 557 aaKnown RBP13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Igsf3Q6ZQA6 1194 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Noc3lQ8VI84 807 aaKnown RBP13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Gm10471E9Q1C7 252 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Hand2Q61039 217 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Znf771Q8BJ90 317 aa13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Luzp1Q8R4U7 1068 aaKnown RBP13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Add3Q9QYB5 706 aaKnown RBP13.25□□□□□ -0.29
Topbp1-201ENSMUST00000035164 DpydQ8CHR6 1025 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Gsdma3Q5Y4Y6 464 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Pnpla2Q8BJ56 486 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Cnnm1Q0GA42 951 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 BcanQ61361 883 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Zscan29E9Q5B4 869 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Stx1aO35526 288 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Limch1Q3UH68 1057 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Lamb3Q61087 1168 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Spty2d1Q68FG3 682 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Zkscan5Q9Z1D8 819 aa13.24□□□□□ -0.29
Topbp1-201ENSMUST00000035164 OvosQ3UU35 1456 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Q3UJC8 639 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Bag1Q60739 355 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Wdr3Q8BHB4 942 aaKnown RBP13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ercc6lQ8BHK9 1240 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ccdc7Q9D541 371 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Znf568E9PYI1 671 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Bcl11bQ99PV8 884 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 GpkowQ56A08 488 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Stac3Q8BZ71 360 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Dnaaf4Q8R368 420 aa13.23□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Tgfb1i1Q62219 461 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 4930504O13RikQ8C5Z9 145 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ifi35Q9D8C4 286 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ugt1a5B2RT14 529 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 FanccP50652 591 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Prpf4bQ61136 1007 aaKnown RBP13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 TfrcQ62351 763 aaKnown RBP13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ccdc112A0AUP1 442 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Gtpbp4Q99ME9 634 aaKnown RBP13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Stxbp4Q9WV89 557 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Ptch1Q61115 1434 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Rab3gap1Q80UJ7 981 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 LratQ9JI60 231 aa13.22□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Pdcd11Q6NS46 1862 aaKnown RBP13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Dnajc25A2ALW5 357 aa13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Gtf2f1Q3THK3 508 aaKnown RBP13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Disp3A3KFU9 1347 aa13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Nckap5lQ6GQX2 1323 aa13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Srek1Q8BZX4 494 aaKnown RBP13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Pcdhb15Q91Y04 786 aa13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Dnajc2P54103 621 aaKnown RBP13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Plcd1Q8R3B1 756 aa13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Rrs1Q9CYH6 365 aaKnown RBP13.21□□□□□ -0.29
Topbp1-201ENSMUST00000035164 Kansl3A2RSY1 903 aaKnown RBP13.21□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ap5z1Q3U829 807 aa13.21□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ccdc158Q8CDI6 1109 aa13.21□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Chmp7Q8R1T1 451 aa13.21□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lmbr1lQ9D1E5 489 aa13.21□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Med14A2ABV5 1459 aaKnown RBP13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 1700113H08RikE9Q9Q5 327 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Hfm1D3Z4R1 1434 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Maats1Q8BRC6 783 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lmbrd2Q8C561 694 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tpm3-rs7D3Z2H9 248 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms