RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Slx4ipQ9D7Y9 413 aa20.48■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 LratQ9JI60 231 aa20.48■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Vwa3bJ9JI28 736 aa20.47■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Soga3Q6NZL0 945 aa20.47■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 LlphQ9D945 130 aaKnown RBP20.47■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Kiaa0232Q80U59 1396 aaKnown RBP20.47■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Abca15E9PWH4 1668 aa20.47■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Rnf123Q5XPI3 1314 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Ms4a2P20490 235 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Nlrp9bQ66X22 1003 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Tjp1P39447 1745 aaKnown RBP20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Plekhd1B2RPU2 505 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 F2rP30558 430 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Pdzrn3Q69ZS0 1063 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Ripor2Q80U16 1078 aa20.46■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Ubr2Q6WKZ8 1755 aa20.45■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Ddx60E9PZQ1 1711 aa20.45■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Neurod6P48986 337 aa20.45■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 VgfQ0VGU4 617 aa20.45■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Cpa2Q504N0 417 aa20.45■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Il4rP16382 810 aa20.44■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Cadps2Q8BYR5 1297 aa20.44■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Cdhr2E9Q7P9 1308 aa20.44■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Fkbp5Q64378 456 aa20.44■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Rad50P70388 1312 aa20.43■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 AnlnQ8K298 1121 aaKnown RBP20.43■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Flad1Q8R123 492 aa20.43■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Syde2E9PUP1 1314 aa20.43■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Dnttip2Q8R2M2 758 aaKnown RBP20.42■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 AppP12023 770 aa20.42■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Filip1lQ6P6L0 1131 aa20.42■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Top1mtQ8R4U6 593 aa20.42■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Bcl9lQ67FY2 1494 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Brwd3A2AHJ4 1799 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 HdgfP51859 237 aaKnown RBP20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 PogkQ80TC5 607 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Nol12Q8BG17 217 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Sf3a1Q8K4Z5 791 aaKnown RBP20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Bag3Q9JLV1 577 aaKnown RBP20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 InsrrQ9WTL4 1300 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Anapc15P60007 132 aa20.41■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Ankle2Q6P1H6 964 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 AceP09470 1312 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Ppfia1B2RXQ2 1266 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Q8C5K5 320 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Pof1bQ8K4L4 587 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Gjb2Q00977 226 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Gtf3c3Q3TMP1 882 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Adam1aQ60813 791 aa20.4■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Mst1rQ62190 1378 aa20.39■□□□□ 0.86
Sec61a1-201ENSMUST00000032168 Igflr1Q3U4N7 345 aa20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Dis3l2Q8CI75 870 aaKnown RBP20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ddx54Q8K4L0 874 aaKnown RBP20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Cap2Q9CYT6 476 aa20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Utp18Q5SSI6 552 aaKnown RBP20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ifit2Q64112 472 aa20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Zbtb40Q6PCS8 1258 aa20.38■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ccnl1Q52KE7 532 aaKnown RBP20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 DbnlQ62418 436 aa20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Fam84aQ9D650 292 aa20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Elmsan1E9Q2I4 1089 aaKnown RBP20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Mdm2P23804 489 aa20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Rtn4Q99P72 1162 aaKnown RBP20.37■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Cdca7lQ922M5 438 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Gadd45bP22339 160 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ddx58Q6Q899 926 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Tceanc2Q8R2M0 207 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Pard3Q99NH2 1333 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ltb4r2Q9JJL9 360 aa20.36■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Morc2aQ69ZX6 1030 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Trim52Q8CDV4 233 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 PrkcshO08795 521 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Gnat3Q3V3I2 354 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Vps54Q5SPW0 977 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Rufy3Q9D394 469 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 DccP70211 1447 aa20.35■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 KinQ8K339 391 aa20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 SlkO54988 1233 aa20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Slx1bQ8BX32 270 aa20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 ZgpatQ8VDM1 511 aa20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Add2Q9QYB8 725 aa20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Rrs1Q9CYH6 365 aaKnown RBP20.34■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Rbm8a2A0A0N4SUH6 174 aa20.33■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Gm45015A0A140LII9 184 aa20.33■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Gm18336A0A140LIU8 765 aa20.33■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 ApobrQ8VBT6 942 aa20.33■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Rbm8aQ9CWZ3 174 aa20.33■□□□□ 0.85
Sec61a1-201ENSMUST00000032168 Ankib1Q6ZPS6 1085 aa20.33■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ints3Q7TPD0 1041 aaKnown RBP20.33■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Chmp3Q9CQ10 224 aa20.33■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Shank2Q80Z38 1476 aa20.33■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Hoxa7P02830 229 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ddx11Q6AXC6 880 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ak2Q9WTP6 239 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ugt1a5B2RT14 529 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 MecomP14404 1042 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Tti2Q8BGV4 512 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Tmx3Q8BXZ1 456 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Ccdc7Q9D541 371 aa20.32■□□□□ 0.84
Sec61a1-201ENSMUST00000032168 Myd88P22366 296 aa20.32■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms