RNA–Protein interactions for RNA: ENSMUST00000030439.14

Rnf220-201, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rnf220, Length 3,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-201ENSMUST00000030439 Polr3gQ6NXY9 223 aa13.68□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Pnma3Q8JZW8 466 aa13.68□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Utp3Q9JI13 469 aaKnown RBP13.68□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Bcl2l12Q9D3J3 255 aa13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Lmod3E9QA62 571 aa13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Hoxc9P09633 260 aa13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 KinQ8K339 391 aa13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Lrrc59Q922Q8 307 aaKnown RBP13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 PtmsQ9D0J8 101 aaKnown RBP13.67□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Atp6v1dP57746 247 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Tgfb1i1Q62219 461 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Pdcl2Q78Y63 240 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Tsr2Q8C8T8 191 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Serpina10Q8R121 448 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Cdhr2E9Q7P9 1308 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Slit2Q9R1B9 1521 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Tnnt2P50752 301 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Ppfia3P60469 1194 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Card10P58660 1021 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Utp18Q5SSI6 552 aaKnown RBP13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 DpydQ8CHR6 1025 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 TatQ8QZR1 454 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Rufy3Q9D394 469 aa13.66□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Cdca7lQ922M5 438 aa13.65□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Smc3Q9CW03 1217 aaKnown RBP13.65□□□□□ -0.22
Rnf220-201ENSMUST00000030439 ScaperF8VQ70 1398 aaKnown RBP13.65□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Nol8Q3UHX0 1147 aaKnown RBP13.65□□□□□ -0.22
Rnf220-201ENSMUST00000030439 Zfp804bA0A0G2JGH6 1343 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ets1P27577 440 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Kdm4aQ8BW72 1064 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ptpn23Q6PB44 1692 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Nkx2-3P97334 362 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ints3Q7TPD0 1041 aaKnown RBP13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Gys2Q8VCB3 704 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Il1rapl2Q9ERS6 686 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Gse1Q3U3C9 1213 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ccdc155Q80VJ8 648 aa13.64□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Gm21698A0A087WQP8 267 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Gm21671G3UY31 267 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Smarce1O54941 411 aaKnown RBP13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 FosbP13346 338 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Fbxo2Q80UW2 297 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Slx1bQ8BX32 270 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ccar2Q8VDP4 922 aaKnown RBP13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Dnajc10Q9DC23 793 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Stx6Q9JKK1 255 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ms4a2P20490 235 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Adcy5P84309 1262 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Mindy4Q3UQI9 744 aa13.63□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Atf5O70191 283 aa13.62□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Hspa2P17156 633 aa13.62□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ccdc66Q6NS45 935 aa13.62□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Top1mtQ8R4U6 593 aa13.62□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Nhsl1Q8CAF4 1587 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Msh6P54276 1358 aaKnown RBP13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 FocadA2AKG8 1798 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Syt1P46096 421 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Anapc15P60007 132 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Map3k2Q61083 619 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Btbd11Q6GQW0 1109 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Tti2Q8BGV4 512 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 4930504O13RikQ8C5Z9 145 aa13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Mrpl50Q8VDT9 159 aaKnown RBP13.61□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Rad50P70388 1312 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Stk36Q69ZM6 1316 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Cd22P35329 862 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Pkp1P97350 728 aaKnown RBP13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Snx13Q6PHS6 957 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Bach2P97303 839 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Cnnm3Q32NY4 713 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Pard3Q99NH2 1333 aa13.6□□□□□ -0.23
Rnf220-201ENSMUST00000030439 MecomP14404 1042 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Bend3Q6PAL0 825 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Smim5Q8BT42 78 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ccdc178Q8CDV0 866 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Sf3a1Q8K4Z5 791 aaKnown RBP13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Acsbg1Q99PU5 721 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Cntnap1O54991 1385 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Strn4P58404 760 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Eif4a1P60843 406 aaKnown RBP13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Fnbp4Q6ZQ03 1031 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Q9D9S1 216 aa13.59□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Samd1D3YXK1 519 aa13.58□□□□□ -0.23
Rnf220-201ENSMUST00000030439 CoilQ5SU73 570 aa13.58□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Ifit2Q64112 472 aa13.58□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Emilin2Q8K482 1074 aa13.58□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Glipr1l2Q9CQ35 332 aa13.58□□□□□ -0.23
Rnf220-201ENSMUST00000030439 Cavin1O54724 392 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Txnrd1Q9JMH6 613 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Adgrb1Q3UHD1 1582 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Kdm6aO70546 1401 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Ubap1lG3UW59 384 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Polr3dQ91WD1 398 aa13.58□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Neurod6P48986 337 aa13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Ddx19aQ61655 478 aaKnown RBP13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Nyap1Q6PFX7 833 aa13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Slc26a8Q8R0C3 999 aa13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Pnpla7A2AJ88 1352 aa13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Lekr1B2RVN1 116 aa13.57□□□□□ -0.24
Rnf220-201ENSMUST00000030439 Cfap73J3QPZ5 306 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms