RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Soga3Q6NZL0 945 aa13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Mrps27Q8BK72 415 aaKnown RBP13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Flad1Q8R123 492 aa13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Dhx38Q80X98 1228 aa13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Slx1bQ8BX32 270 aa13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Bloc1s4Q8VED2 215 aa13.29□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Ddx60E9PZQ1 1711 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 VgfQ0VGU4 617 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Slc26a8Q8R0C3 999 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 ZgpatQ8VDM1 511 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 LratQ9JI60 231 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Noc3lQ8VI84 807 aaKnown RBP13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Il1rapl2Q9ERS6 686 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Gdpd2Q9ESM6 539 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 AceP09470 1312 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Pard3Q99NH2 1333 aa13.28□□□□□ -0.28
Cfap54-201ENSMUST00000020200 Fkbp5Q64378 456 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Amer1Q7TS75 1132 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Cap2Q9CYT6 476 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Syde2E9PUP1 1314 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Rnf123Q5XPI3 1314 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ccnl1Q52KE7 532 aaKnown RBP13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ankle2Q6P1H6 964 aa13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 DekQ7TNV0 380 aaKnown RBP13.27□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Neurod6P48986 337 aa13.26□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Mcm4P49717 862 aa13.26□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ms4a2P20490 235 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 EvcP57680 1005 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Morc2aQ69ZX6 1030 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Zbtb40Q6PCS8 1258 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 InsrrQ9WTL4 1300 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 MccE9PWI3 1003 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Adam1aQ60813 791 aa13.25□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Vsig10D3YX43 558 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 NexnQ7TPW1 607 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Trim52Q8CDV4 233 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Slx4ipQ9D7Y9 413 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 LlphQ9D945 130 aaKnown RBP13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Vwa3bJ9JI28 736 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 AppP12023 770 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Zdhhc9P59268 364 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ddx58Q6Q899 926 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Sf3a1Q8K4Z5 791 aaKnown RBP13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 ApobrQ8VBT6 942 aa13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Bag3Q9JLV1 577 aaKnown RBP13.24□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Akap11E9Q777 1895 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Rasa1E9PYG6 1038 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Igflr1Q3U4N7 345 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Pdzrn3Q69ZS0 1063 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Zkscan1Q8BGS3 561 aaKnown RBP13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Q8C5K5 320 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ltb4r2Q9JJL9 360 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Bag4Q8CI61 457 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Dis3l2Q8CI75 870 aaKnown RBP13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Rad50P70388 1312 aa13.23□□□□□ -0.29
Cfap54-201ENSMUST00000020200 F2rP30558 430 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Gimap5Q8BWF2 308 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ppfia1B2RXQ2 1266 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Gnat3Q3V3I2 354 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Top1mtQ8R4U6 593 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Mst1rQ62190 1378 aa13.22□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Smg7Q5RJH6 1138 aaKnown RBP13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 DbnlQ62418 436 aa13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Tiam2Q6ZPF3 1715 aa13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Anapc15P60007 132 aa13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Ankib1Q6ZPS6 1085 aa13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 AnlnQ8K298 1121 aaKnown RBP13.21□□□□□ -0.29
Cfap54-201ENSMUST00000020200 Shank2Q80Z38 1476 aa13.21□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Myd88P22366 296 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Gm12185Q5NCB2 835 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Rtn4Q99P72 1162 aaKnown RBP13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Fam84aQ9D650 292 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Ank1Q02357 1862 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 AK157302I3ITR1 129 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Cpa2Q504N0 417 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Ifit2Q64112 472 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Filip1lQ6P6L0 1131 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Ipo4Q8VI75 1082 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Isca1Q9D924 129 aa13.2□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Hoxa7P02830 229 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Mdm2P23804 489 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Gjb2Q00977 226 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Tmem87bQ8BKU8 555 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Rrs1Q9CYH6 365 aaKnown RBP13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Cwc25Q9DBF7 416 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Vps54Q5SPW0 977 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Utp18Q5SSI6 552 aaKnown RBP13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Znf526Q8BI66 675 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Crb1Q8VHS2 1405 aa13.19□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Cyb5rlB1AS42 316 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Timm10P62073 90 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Ttc19Q8CC21 365 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Pof1bQ8K4L4 587 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Chmp3Q9CQ10 224 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Stard3nlQ9DCI3 235 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 PogkQ80TC5 607 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Cdca7lQ922M5 438 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Add2Q9QYB8 725 aa13.18□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Elmsan1E9Q2I4 1089 aaKnown RBP13.17□□□□□ -0.3
Cfap54-201ENSMUST00000020200 Sult6b1P0CC03 303 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms