RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Bcl11aQ9QYE3 773 aa11.19□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Sycp2Q9CUU3 1500 aa11.19□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Slc38a10Q5I012 1090 aa11.19□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Irf9Q61179 399 aa11.19□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Sos1Q62245 1319 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Cnga2Q62398 664 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Krt15Q61414 452 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Nip7Q9CXK8 180 aaKnown RBP11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 WaplQ65Z40 1200 aaKnown RBP11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Erlin1Q91X78 346 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 TimelessQ9R1X4 1197 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Elf1Q60775 612 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Clip2Q9Z0H8 1047 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Smarca4Q3TKT4 1613 aaKnown RBP11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Stx8O88983 236 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Krt13P08730 437 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Haus2Q9CQS9 234 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 GabpaQ00422 454 aa11.18□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 TnikP83510 1323 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Tldc2A2ACG1 198 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Atp2b1G5E829 1220 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 FerP70451 823 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Tmc2Q8R4P4 888 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Stoml1Q8CI66 399 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Drc3Q9D5E4 523 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ssrp1Q08943 708 aaKnown RBP11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Znf653Q6YND2 615 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 EprsQ8CGC7 1512 aaKnown RBP11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Cavin1O54724 392 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Slc27a3O88561 667 aa11.17□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Sh2d4bA6X942 431 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Trim25Q61510 634 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Taf7lQ9D3R9 471 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Spag5Q7TME2 1165 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ankle2Q6P1H6 964 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Maats1Q8BRC6 783 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 CarsQ9ER72 831 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Mtmr7Q9Z2C9 660 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 SfpqQ8VIJ6 699 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Prkrip1Q9CWV6 186 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Gbp8Q2V6D6 525 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Wdr33Q8K4P0 1330 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ppp1r15aP17564 657 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Pde1cQ64338 706 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ift140E9PY46 1464 aa11.16□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Atp2b4Q6Q477 1205 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Krt23Q99PS0 422 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Mex3cQ05A36 652 aaKnown RBP11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Nek5Q7TSC3 627 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 InsrP15208 1372 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Gm4758L7N258 96 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ivns1abpQ920Q8 642 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Krt20Q9D312 431 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Kmt5bQ3U8K7 883 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Ccdc83Q9D4V3 305 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 2310002L09RikQ9D7L5 217 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Cog6Q8R3I3 657 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Dpp7Q9ET22 506 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Gjc1P28229 396 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 NppbP40753 121 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Cep120Q7TSG1 988 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Tnpo1Q8BFY9 898 aaKnown RBP11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Smco2Q9DA21 347 aa11.15□□□□□ -0.62
Sptbn1-202ENSMUST00000011877 Nacc1Q7TSZ8 514 aa11.15□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Ift57Q8BXG3 429 aa11.15□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Tbc1d8Q9Z1A9 1134 aa11.15□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Apol7aB2RT54 418 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Abcf1Q6P542 837 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Sde2Q8K1J5 448 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Calm1P0DP26 149 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Calm2P0DP27 149 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Calm3P0DP28 149 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 RtcbQ99LF4 505 aaKnown RBP11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Tbc1d2B1AVH7 922 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Map3k7clP58500 142 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Spa17Q62252 149 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 GnaqP21279 359 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Frmd3Q8BHD4 595 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Cabp5Q9JLK3 173 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Ppp1r9aH3BJD6 1292 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Psmc4P54775 418 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Ccdc42Q5SV66 316 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Sil1Q9EPK6 465 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Letm1Q9Z2I0 738 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Eif6O55135 245 aa11.14□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Atp2b3Q0VF55 1220 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Kif18aQ91WD7 886 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Mcur1Q9CXD6 340 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Fam184aE9PW83 1143 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Lrrc43Q3V0L5 667 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Tom1l2Q5SRX1 507 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Ccne1Q61457 408 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Tacc3Q9JJ11 631 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Homer2Q9QWW1 354 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Anapc15-psA0A140T8L6 141 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Nolc1E9Q5C9 702 aaKnown RBP11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Ddb1Q3U1J4 1140 aaKnown RBP11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Kif5bQ61768 963 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Myom3A2ABU4 1439 aa11.13□□□□□ -0.63
Sptbn1-202ENSMUST00000011877 Tex35Q14BK3 207 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms