RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Mtmr3Q8K296 1196 aa10.62□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Echdc1Q9D9V3 322 aa10.62□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Pik3c2gO70167 1506 aa10.62□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Mapkbp1Q6NS57 1503 aa10.62□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Hand2Q61039 217 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Exoc8Q6PGF7 716 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ppp1r9bQ6R891 817 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 LarsQ8BMJ2 1178 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Matr3Q8K310 846 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Slc14a2Q8R4T9 930 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 ParvgQ9ERD8 331 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Lamc3Q9R0B6 1581 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Stat1P42225 749 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ube2hP62257 183 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ctnnbl1Q9CWL8 563 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Mybbp1aQ7TPV4 1344 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Zscan29E9Q5B4 869 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Exoc5Q3TPX4 708 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Slc5a4bQ91ZP4 660 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Klhl10Q9D5V2 608 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Slx4Q6P1D7 1565 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ripply1Q2WG77 201 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Lman1Q9D0F3 517 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Baiap2l1Q9DBJ3 514 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Zkscan7E9PVW1 718 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Znf18Q810A1 556 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ano2Q8CFW1 1002 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Krt23Q99PS0 422 aa10.61□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ppfia1B2RXQ2 1266 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Cbx1P83917 185 aaKnown RBP10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Tmx4Q8C0L0 335 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Gm42641I6L9G2 585 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 AtripQ8BMG1 785 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Cfap53Q9D439 514 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Sil1Q9EPK6 465 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Pet2A2AHY8 747 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Dapk3O54784 448 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Triml1Q8BVP1 470 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Plekho1Q9JIY0 408 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Homer1Q9Z2Y3 366 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Kank1E9Q238 1360 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ankrd26Q811D2 1581 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 KdrP35918 1367 aa10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Naa15Q80UM3 865 aaKnown RBP10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 RarsQ9D0I9 660 aaKnown RBP10.6□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ift74Q8BKE9 600 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Tbc1d32Q3URV1 1296 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Rapgef3Q8VCC8 918 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Snw1Q9CSN1 536 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Naip5Q9R016 1403 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ktn1Q61595 1327 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ttc21aQ8C0S4 1314 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Paxbp1P58501 919 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ccdc73Q8CDM4 1066 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 4931400O07RikQ9D4M5 137 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 LlphQ9D945 130 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Ccdc112A0AUP1 442 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Zap70P43404 618 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Egfem1Q8C088 590 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Zbtb3Q91X45 518 aa10.59□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Rnf216P58283 853 aa10.58□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Kmt5bQ3U8K7 883 aa10.58□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Rbm19Q8R3C6 952 aaKnown RBP10.58□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 BbxQ8VBW5 907 aa10.58□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Krt25Q8VCW2 446 aa10.58□□□□□ -0.71
Pdgfra-201ENSMUST00000000476 Hoxb7P09024 217 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Zfp42P22227 288 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Dzip1Q8BMD2 852 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tmem266Q8BZB3 538 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Srgap1Q91Z69 1062 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Smc1bQ920F6 1248 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Stx8O88983 236 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ccdc93Q7TQK5 629 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Efcab2Q9CQ46 164 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Klhdc4Q921I2 584 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Smc1aQ9CU62 1233 aaKnown RBP10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Mmel1Q9JLI3 765 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Fancd2Q80V62 1450 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Akap2O54931 893 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gle1Q8R322 699 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Nip7Q9CXK8 180 aaKnown RBP10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ctnna2Q61301 953 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Hook3Q8BUK6 718 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Serpina10Q8R121 448 aa10.58□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Atp7aQ64430 1491 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ppfia3P60469 1194 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Gm21985Q6P6P5 1106 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Pkd2l2Q9JLG4 621 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Tbc1d8bA3KGB4 1114 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Smco2Q9DA21 347 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 WtapQ9ER69 396 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ddx46Q569Z5 1032 aaKnown RBP10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Cep135Q6P5D4 1140 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Usp25P57080 1055 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Ssrp1Q08943 708 aaKnown RBP10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 U2af1l4Q8BGJ9 220 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Vps16Q920Q4 839 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Rbbp8nlA2ABX0 614 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Slc1a4O35874 532 aa10.57□□□□□ -0.72
Pdgfra-201ENSMUST00000000476 Smarcc1P97496 1104 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms