RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RALBP11234 206 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 TSPAN8P19075 237 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 UQCRC2P22695 453 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 CYLC1P35663 651 aaPredicted RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 SSR1P43307 286 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 FNTAP49354 379 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 B3GALT5-AS1P59052 145 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 HERV-K104P61576 105 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ABATP80404 500 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 MAP2K1Q02750 393 aaPredicted RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 SRYQ05066 204 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 IL18Q14116 193 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 MESDQ14696 234 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 CAMK4Q16566 473 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ODF3L2Q3SX64 289 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 Q4G0T1 1027 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 BCL7AQ4VC05 210 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PLPP4Q5VZY2 271 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 OR4C11Q6IEV9 310 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PYHIN1Q6K0P9 492 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 RHBDF2Q6PJF5 856 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SHC4Q6S5L8 630 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 DPY19L4Q7Z388 723 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 BIVMQ86UB2 503 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SERINC5Q86VE9 423 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PAQR7Q86WK9 346 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 SFR1Q86XK3 245 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ECHDC2Q86YB7 292 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 VSTM4Q8IW00 320 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 GPC2Q8N158 579 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ARFGAP2Q8N6H7 521 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ADAD2Q8NCV1 583 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 SPATA4Q8NEY3 305 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 OR5D13Q8NGL4 314 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ZNF473Q8WTR7 871 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 STARD8Q92502 1023 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 DPF1Q92782 380 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PEX13Q92968 403 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 NXPE2Q96DL1 559 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PRICKLE1Q96MT3 831 aaPredicted RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 C17orf77Q96MU5 243 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ZNF385AQ96PM9 386 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 ERGIC2Q96RQ1 377 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 IL12RB2Q99665 862 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PELI2Q9HAT8 420 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 C1orf123Q9NWV4 160 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 FLRT3Q9NZU0 649 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 HACD3Q9P035 362 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 POU2F3Q9UKI9 436 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PRDM4Q9UKN5 801 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ZNF346Q9UL40 294 aaKnown RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 KIAA1257Q9ULG3 409 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 RPH3ALQ9UNE2 315 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PIGLQ9Y2B2 252 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 WDR45Q9Y484 360 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 FKBP7Q9Y680 259 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 PTPRUQ92729 1446 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 COL11A2P13942 1736 aaPredicted RBP3.41□□□□□ -1.86
TDP1-217ENST00000557782 KIF7Q2M1P5 1343 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 CLSPNQ9HAW4 1339 aa3.41□□□□□ -1.86
TDP1-217ENST00000557782 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.86
TDP1-217ENST00000557782 PLEKHG2Q9H7P9 1386 aa3.4□□□□□ -1.86
TDP1-217ENST00000557782 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 HEATR9A2RTY3 570 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 LRRC30A6NM36 301 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 WASHC1A8K0Z3 465 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 NPIPB8E9PQR5 432 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SH2D1BO14796 132 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 KLF11O14901 512 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 EPHB6O15197 1021 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 STX7O15400 261 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 B4GAT1O43505 415 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 KRT14P02533 472 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 LYNP07948 512 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ALPIP09923 528 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SLC35G4P0C7Q5 338 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 CDH1P12830 882 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 HLA-DOBP13765 273 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 CYP11B1P15538 503 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 HOXA5P20719 270 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 GLRA1P23415 457 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 ANP32AP39687 249 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 HTR5AP47898 357 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 PTH2RP49190 550 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 CDH4P55283 916 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 NAAAQ02083 359 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 EIF4G1Q04637 1599 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 TGM3Q08188 693 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 BST1Q10588 318 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 TRAF3Q13114 568 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 RBMS2Q15434 407 aaKnown RBP3.4□□□□□ -1.87
TDP1-217ENST00000557782 PCK2Q16822 640 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 SPANXN2Q5MJ10 180 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 AADACL4Q5VUY2 407 aa3.4□□□□□ -1.87
TDP1-217ENST00000557782 CLEC2AQ6UVW9 174 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms