RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CYB5BO43169 146 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 RFPL1O75677 317 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 VNN2O95498 520 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 IFNA5P01569 189 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 FGF3P11487 239 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ETS2P15036 469 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 JUNDP17535 347 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CKMT2P17540 419 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CDK2P24941 298 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CST5P28325 142 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 EVX2Q03828 476 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SPIN3Q5JUX0 258 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 LCN8Q6JVE9 175 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 GPR137CQ8N3F9 429 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CLDN19Q8N6F1 224 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 LRRC20Q8TCA0 184 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CHPT1Q8WUD6 406 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 FAM46BQ96A09 425 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ACTRT3Q9BYD9 372 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 PREBQ9HCU5 417 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SLC2A6Q9UGQ3 507 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 PRKAB1Q9Y478 270 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SDHDO14521 159 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CDRT1O95170 752 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 LCN1P31025 176 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 RPL6Q02878 288 aaKnown RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CHRFAM7AQ494W8 412 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SLC22A10Q63ZE4 541 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 OR5AK3PQ8NH89 298 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 LMO3Q8TAP4 145 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 CNN2Q99439 309 aaKnown RBP10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SLC6A14Q9UN76 642 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 SLC35A3Q9Y2D2 325 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 MAB21L2Q9Y586 359 aa10.26□□□□□ -0.77
ACTN1-216ENST00000556083 MBLAC1A4D2B0 266 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 H7BY64 318 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 BRINP1O60477 761 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 APOL3O95236 402 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 S100A2P29034 98 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PITPNBP48739 271 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLAMF1Q13291 335 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 CAMK2DQ13557 499 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PTPRRQ15256 657 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLC18B1Q6NT16 456 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 IL22RA1Q8N6P7 574 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 MYRFLQ96LU7 910 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PRAP1Q96NZ9 151 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLC17A9Q9BYT1 436 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 MALT1Q9UDY8 824 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 MLXQ9UH92 298 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 AFDNP55196 1824 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TCRBV7S3A2A0A539 114 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TCRBV21S2A2A0A5A6 115 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 A8MUA0 341 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 B8ZZF3 427 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SCAMP2O15127 329 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 UCHL1P09936 223 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 ITGB7P26010 798 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PDHA2P29803 388 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 GABRA3P34903 492 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TBPL1P62380 186 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TEX26Q8N6G2 289 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TCEANCQ8N8B7 351 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 CCDC71LQ8N9Z2 235 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 OR6N2Q8NGY6 317 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 COQ8AQ8NI60 647 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PROKR1Q8TCW9 393 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 ZFYVE21Q9BQ24 234 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TOR3AQ9H497 397 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 INPP5EQ9NRR6 644 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 RXFP3Q9NSD7 469 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 UCKL1Q9NWZ5 548 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 HIF3AQ9Y2N7 669 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 HTRA2O43464 458 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 ITGB1P05556 798 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 CFHP08603 1231 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 GRK1Q15835 563 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 OGFOD2Q6N063 350 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TXNDC5Q8NBS9 432 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 KCT2Q8NC54 265 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SFXN5Q8TD22 340 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 MS4A4EQ96PG1 132 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 GFM1Q96RP9 751 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 YIPF4Q9BSR8 244 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 DPH7Q9BTV6 452 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 GPR32O75388 356 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SEMA4FO95754 770 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 VAMP1P23763 118 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 HLCSP50747 726 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 VSX2P58304 361 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLC3A1Q07837 685 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 RAB41Q5JT25 222 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 CES4AQ5XG92 561 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SLC39A5Q6ZMH5 540 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms