RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 PPIAL4AQ9Y536 164 aa0.7□□□□□ -2.3
RNU6-1228P-201ENST00000391014 COL5A1P20908 1838 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACEP12821 1306 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PLOD3O60568 738 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 WDHD1O75717 1129 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 OR6A2O95222 327 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 C6orf47O95873 294 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ANKRD34CP0C6C1 535 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ALOX12P18054 663 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 LBPP18428 481 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACKR3P25106 362 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PSMB4P28070 264 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACTN2P35609 894 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CRKLP46109 303 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 OR3A4PP47883 348 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 RXRGP48443 463 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MFAP2P55001 183 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 RPL27P61353 136 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TNK1Q13470 666 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CUL4AQ13619 759 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SERTAD2Q14140 314 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PTGES3Q15185 160 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 KRT31Q15323 416 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SF3A2Q15428 464 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MEA1Q16626 185 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 DCST2Q5T1A1 773 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 C1orf189Q5VU69 101 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 METTL11BQ5VVY1 283 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 RBPMS2Q6ZRY4 209 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 KRT77Q7Z794 578 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ARIH2OSQ8N7S6 290 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CHDHQ8NE62 594 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MARCH1Q8TCQ1 289 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MARC2Q969Z3 335 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PNPLA2Q96AD5 504 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 C16orf58Q96GQ5 468 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PRMT1Q99873 361 aaKnown RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TREX2Q9BQ50 279 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 C19orf43Q9BQ61 176 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ST6GALNAC5Q9BVH7 336 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 RNF41Q9H4P4 317 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 INPP5EQ9NRR6 644 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 FAM212BQ9NTI7 297 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PDRG1Q9NUG6 133 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 BLOC1S4Q9NUP1 217 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SEC14L4Q9UDX3 406 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ZNF223Q9UK11 482 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 WSB1Q9Y6I7 421 aa0.69□□□□□ -2.3
RNU6-1228P-201ENST00000391014 GTF3C1Q12789 2109 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 A0A0G2JLM5 398 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TRBC2A0A5B9 178 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SYNDIG1LA6NDD5 238 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TRABD2BA6NFA1 517 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 DLGAP1O14490 977 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 NBR2O15453 112 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 DIAPH2O60879 1101 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 GRAP2O75791 330 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 EIF3JO75822 258 aaKnown RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MMP23AO75900 390 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MOCS2O96007 188 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 GOT2P00505 430 aaKnown RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CCDC166P0CW27 439 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PDGFRAP16234 1089 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PSMA3P25788 255 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 GJB2P29033 226 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MTIF2P46199 727 aaKnown RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 RPS10P46783 165 aaKnown RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 OR3A1P47881 315 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ZNF136P52737 540 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 MZT1Q08AG7 82 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CRY2Q49AN0 593 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 UNC50Q53HI1 259 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ACER2Q5QJU3 275 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 WDR78Q5VTH9 848 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 FAM46CQ5VWP2 391 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 CCDC70Q6NSX1 233 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PRSS48Q7RTY5 328 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 UNC5CLQ8IV45 518 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SMC5Q8IY18 1101 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ZNF444Q8N0Y2 327 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 GVQW1Q8N7I0 195 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 PI4KAP1Q8N8J0 262 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 NCOA7Q8NI08 942 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 BLOC1S5Q8TDH9 187 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ARNTL2Q8WYA1 636 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 C9orf85Q96MD7 179 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TSSK2Q96PF2 358 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 NRTNQ99748 197 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ELOVL4Q9GZR5 314 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 WWP1Q9H0M0 922 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ZNF665Q9H7R5 613 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 WDR35Q9P2L0 1181 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 LEF1Q9UJU2 399 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 NOCTQ9UK39 431 aaKnown RBP0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TMEM5Q9Y2B1 443 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 SLCO1B1Q9Y6L6 691 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 FAM169AQ9Y6X4 670 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 ITGB4P16144 1822 aa0.68□□□□□ -2.3
RNU6-1228P-201ENST00000391014 IGLV4-69A0A075B6H9 119 aa0.67□□□□□ -2.3
RNU6-1228P-201ENST00000391014 TRBV6-6A0A0A6YYG2 114 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms