RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 OTOP2Q7RTS6 562 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 PDZD3Q86UT5 571 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 FAM129CQ86XR2 697 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 PLA2G15Q8NCC3 412 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 KREMEN2Q8NCW0 462 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 OR6F1Q8NGZ6 308 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SUN3Q8TAQ9 357 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 TEX47Q8TBZ9 253 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SLC38A5Q8WUX1 472 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 CAPSLQ8WWF8 208 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 ACOT12Q8WYK0 555 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 OR8D1Q8WZ84 308 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 UFD1Q92890 307 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 CIDECQ96AQ7 238 aaPredicted RBP10.34□□□□□ -0.75
LCN2-202ENST00000372998 ZC3HAV1LQ96H79 300 aaKnown RBP10.34□□□□□ -0.75
LCN2-202ENST00000372998 PRRC1Q96M27 445 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 OR2A14Q96R47 310 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 PHOX2BQ99453 314 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 KCNS3Q9BQ31 491 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 PINK1Q9BXM7 581 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 MS4A8Q9BY19 250 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 ZBP1Q9H171 429 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 CXorf36Q9H7Y0 433 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 EVA1AQ9H8M9 152 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 DDX28Q9NUL7 540 aaKnown RBP10.34□□□□□ -0.75
LCN2-202ENST00000372998 FBXL12Q9NXK8 326 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SAGE1Q9NXZ1 904 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SLC13A4Q9UKG4 626 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 SNX8Q9Y5X2 465 aa10.34□□□□□ -0.75
LCN2-202ENST00000372998 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 EDDM13A0A1B0GTR0 161 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 FABP12A6NFH5 140 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 PRODHO43272 600 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 PRKYO43930 277 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 LZTS3O60299 673 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 SLC19A2O60779 497 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 KCNJ13O60928 360 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 CLEC3AO75596 197 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 POP7O75817 140 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 AGR2O95994 175 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 NR2F1P10589 423 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 IL7P13232 177 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 SYN1P17600 705 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TNFRSF1BP20333 461 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 ACADLP28330 430 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 GABRA5P31644 462 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TGFBR1P36897 503 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 RPS19P39019 145 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 TSFMP43897 325 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 CCT3P49368 545 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 REEP5Q00765 189 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TARDBPQ13148 414 aaKnown RBP eCLIP10.33□□□□□ -0.76
LCN2-202ENST00000372998 TSTA3Q13630 321 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 GANABQ14697 944 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 QPRTQ15274 297 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 SF1Q15637 639 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 MPEG1Q2M385 716 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TCTN1Q2MV58 587 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 MINDY4Q4G0A6 757 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TMEM52BQ4KMG9 183 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 HACD4Q5VWC8 232 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 TCTN3Q6NUS6 607 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 C1orf94Q6P1W5 598 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 FAM131AQ6UXB0 335 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 PHC2Q8IXK0 858 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 PEX5LQ8IYB4 626 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 ASCC1Q8N9N2 400 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 SRFBP1Q8NEF9 429 aaKnown RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 OR56A1Q8NGH5 318 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 CD99L2Q8TCZ2 262 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 TM4SF18Q96CE8 201 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 SCLYQ96I15 445 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 MRGPRX3Q96LB0 322 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 DEPDC7Q96QD5 511 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 NELL2Q99435 816 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 FUZQ9BT04 418 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 SRRQ9GZT4 340 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 MCOLN1Q9GZU1 580 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 BTBD1Q9H0C5 482 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 C11orf16Q9NQ32 467 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 KLHL28Q9NXS3 571 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 DPP7Q9UHL4 492 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 MBD1Q9UIS9 605 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 KLHL21Q9UJP4 597 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 POU2F3Q9UKI9 436 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 LIPT1Q9Y234 373 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 POLHQ9Y253 713 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 SLC27A6Q9Y2P4 619 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 CAB39Q9Y376 341 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 DENND4AQ7Z401 1863 aa10.33□□□□□ -0.76
LCN2-202ENST00000372998 NUP214P35658 2090 aaPredicted RBP10.33□□□□□ -0.76
LCN2-202ENST00000372998 TRBV4-1A0A0J9YWV2 114 aa10.32□□□□□ -0.76
LCN2-202ENST00000372998 TMEM202A6NGA9 273 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms