RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 HMGB4Q8WW32 186 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 CSF3RQ99062 836 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 TREX2Q9BQ50 279 aaPredicted RBP13.24□□□□□ -0.29
NXF1-201ENST00000294172 RSPO3Q9BXY4 272 aaPredicted RBP13.24□□□□□ -0.29
NXF1-201ENST00000294172 KCNK12Q9HB15 430 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 P2RX2Q9UBL9 471 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 SEC14L3Q9UDX4 400 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
NXF1-201ENST00000294172 PRAMEF27A3QJZ7 478 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 FAM227AF5H4B4 570 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 FFAR1O14842 300 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 NDUFS2O75306 463 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 GUCY1B2O75343 617 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 APBB3O95704 486 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 MT-ND2P03891 347 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 NDUFS1P28331 727 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 GGT2P36268 569 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 ENTPD1P49961 510 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 DGCR6Q14129 220 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 PRRT3Q5FWE3 981 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 DHRS4L2Q6PKH6 230 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 DEF8Q6ZN54 512 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 ZNF605Q86T29 641 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 RBM45Q8IUH3 476 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 AQP11Q8NBQ7 271 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 DENND6BQ8NEG7 585 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 OR10G6Q8NH81 332 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 CNRIP1Q96F85 164 aaPredicted RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 MSLNLQ96KJ4 702 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 ZNF607Q96SK3 696 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 AMBNQ9NP70 447 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 ENTPD4Q9Y227 616 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 LRRC72A6NJI9 287 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 H3BQ06 376 aaPredicted RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 CD6P30203 668 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 DGKEP52429 567 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 SRP54P61011 504 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 DUSP2Q05923 314 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 SFSWAPQ12872 951 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 BNIP3Q12983 259 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 TMEM107Q6UX40 140 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 SMRP1Q8NCR6 262 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 SRFBP1Q8NEF9 429 aaKnown RBP13.23□□□□□ -0.29
NXF1-201ENST00000294172 DNASE1L2Q92874 299 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 GDF15Q99988 308 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 KLHL25Q9H0H3 589 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 SEMA3GQ9NS98 782 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 PSME2Q9UL46 239 aa13.23□□□□□ -0.29
NXF1-201ENST00000294172 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 SERPINB7O75635 380 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 GASTP01350 101 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 PPP2R1BP30154 601 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 LIMS1P48059 325 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 HMGA2P52926 109 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 COLEC12Q5KU26 742 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 MRM1Q6IN84 353 aaKnown RBP13.22□□□□□ -0.29
NXF1-201ENST00000294172 PAQR7Q86WK9 346 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 TRIM69Q86WT6 500 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 SUN3Q8TAQ9 357 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 NECTIN4Q96NY8 510 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 MAPKAP1Q9BPZ7 522 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 WFDC6Q9BQY6 131 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 SARGQ9BW04 601 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 PLGRKTQ9HBL7 147 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 GALNT8Q9NY28 637 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 KLF15Q9UIH9 416 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 E9PQ18 207 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 M0R129 80 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 HMGN2P05204 90 aaKnown RBP13.22□□□□□ -0.29
NXF1-201ENST00000294172 GABRG2P18507 467 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 MAGP20916 626 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 PSMB9P28065 219 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 POU1F1P28069 291 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 AKT2P31751 481 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 RANBP1P43487 201 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 MASP1P48740 699 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 TMED1Q13445 227 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 ALG11Q2TAA5 492 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 EOGTQ5NDL2 527 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 Q6ZSR6 202 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 VN1R4Q7Z5H5 301 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 NLGN4XQ8N0W4 816 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 APOBEC4Q8WW27 367 aaKnown RBP13.22□□□□□ -0.29
NXF1-201ENST00000294172 FKBP10Q96AY3 582 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 C8orf33Q9H7E9 229 aaPredicted RBP13.22□□□□□ -0.29
NXF1-201ENST00000294172 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 NMNAT1Q9HAN9 279 aaPredicted RBP13.22□□□□□ -0.29
NXF1-201ENST00000294172 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 ZSCAN32Q9NX65 697 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms