RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 PRAMEF4O60810 478 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ENTPD6O75354 484 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 GASTP01350 101 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FURINP09958 794 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 IGFBP4P22692 258 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 IL12RB1P42701 662 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TUBA1BP68363 451 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SPHARQ15513 63 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CST6Q15828 149 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 NDUFA5Q16718 116 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FBXO43Q4G163 708 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 PRAMEF9Q5VWM5 478 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TAF8Q7Z7C8 310 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 VN1R2Q8NFZ6 395 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 MMP27Q9H306 513 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ANKRA2Q9H9E1 313 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SOHLH2Q9NX45 425 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TEX10Q9NXF1 929 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SIP14410 1827 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 URADA6NGE7 173 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC16A6O15403 523 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF821O75541 412 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ITGB7P26010 798 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 HYAL2Q12891 473 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 AQP6Q13520 282 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FRMPD2BQ6IN97 320 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF671Q8TAW3 534 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 GPN2Q9H9Y4 310 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CNIH4Q9P003 139 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 HSPE1-MOB4S4R3N1 261 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TRBV4-1A0A0J9YWV2 114 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 UPK1AO00322 258 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TYRP1P17643 537 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CELP19835 753 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 HSD17B2P37059 387 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 RORCP51449 518 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF750Q32MQ0 723 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TMEM31Q5JXX7 168 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FAM92BQ6ZTR7 304 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 RBM45Q8IUH3 476 aaKnown RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CHTF18Q8WVB6 975 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 EPYCQ99645 322 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TBX21Q9UL17 535 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 MGAT4BQ9UQ53 548 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FAM240BA0A1B0GVZ2 78 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC5A10A0PJK1 596 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 BTN3A3O00478 584 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 PTHP01270 115 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 LIPAP38571 399 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC19A1P41440 591 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 CDH11P55287 796 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 FBXW4P57775 412 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF155Q12901 538 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 RUNX3Q13761 415 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 PLET1Q6UQ28 207 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 Q6ZNX1 250 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 ANKRD33Q7Z3H0 272 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC38A5Q8WUX1 472 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 GATAD2BQ8WXI9 593 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 TSACCQ96A04 125 aaPredicted RBP12.91□□□□□ -0.34
RAB3D-201ENST00000222120 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
RAB3D-201ENST00000222120 DNAJB5O75953 348 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HMGN2P05204 90 aaKnown RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HNRNPA1P09651 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HOXB2P14652 356 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 IDUAP35475 653 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SMSP52788 366 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CLDN2P57739 230 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 IRAK1BP1Q5VVH5 260 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 OR4C11Q6IEV9 310 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF761Q86XN6 746 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SAMD11Q96NU1 681 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 MCHR1Q99705 422 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TMPRSS11EQ9UL52 423 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SH2B3Q9UQQ2 575 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 WDR45Q9Y484 360 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 BMP4P12644 408 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 DDCP20711 480 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 GPR4P46093 362 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CDK3Q00526 305 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 STX4Q12846 297 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms