RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TUBA8Q9NY65 449 aaPredicted RBP16.73■□□□□ 0.27
CHD3-214ENST00000572579 ADGRE2Q9UHX3 823 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 CACNA1CQ13936 2221 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 PPP6CO00743 305 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 IGHG3P01860 377 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 RFPL3SP0C7P2 107 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 PTX3P26022 381 aaPredicted RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 TYK2P29597 1187 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 MAGEA5P43359 124 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 TFF3Q07654 80 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 RTL6Q6ICC9 239 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 RPS27LQ71UM5 84 aaKnown RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 CCDC71Q8IV32 467 aaPredicted RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 TMEM151AQ8N4L1 468 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 GOLM1Q8NBJ4 401 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 OR5L2Q8NGL0 311 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 NUBPLQ8TB37 319 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 SLC44A1Q8WWI5 657 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 SGCZQ96LD1 299 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 DGAT2Q96PD7 388 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 SPOCK3Q9BQ16 436 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 FAM173AQ9BQD7 235 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 VPS11Q9H270 941 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 NOL11Q9H8H0 719 aaKnown RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 IL1RL2Q9HB29 575 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 NPDC1Q9NQX5 325 aaPredicted RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 PNPLA3Q9NST1 481 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
CHD3-214ENST00000572579 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
CHD3-214ENST00000572579 A0A1B0GVC2 190 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 CCDC189A1A4V9 331 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 SYNDIG1LA6NDD5 238 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 NPIPA2E9PIF3 369 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 NPIPA3F8WFD2 350 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 GPR75O95800 540 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 AIFM1O95831 613 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 SBK3P0C264 359 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 FAM58BPP0C7Q3 252 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 ALOX15P16050 662 aaPredicted RBP16.71■□□□□ 0.27
CHD3-214ENST00000572579 IGFBP2P18065 325 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 RAP1GDS1P52306 607 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 PLGLB1Q02325 96 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 CUL3Q13618 768 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 HYAL4Q2M3T9 481 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 TRILQ7L0X0 811 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 GDF7Q7Z4P5 450 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 CCDC91Q7Z6B0 441 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 PTGR2Q8N8N7 351 aaPredicted RBP16.71■□□□□ 0.27
CHD3-214ENST00000572579 OR5M9Q8NGP3 310 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 PHF21BQ96EK2 531 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 RBM18Q96H35 190 aaKnown RBP16.71■□□□□ 0.27
CHD3-214ENST00000572579 FBXL20Q96IG2 436 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 CDC42EP4Q9H3Q1 356 aaKnown RBP16.71■□□□□ 0.27
CHD3-214ENST00000572579 RUBCNLQ9H714 662 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 MS4A12Q9NXJ0 267 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 PSD3Q9NYI0 1048 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 RNF6Q9Y252 685 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 ANGPTL3Q9Y5C1 460 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
CHD3-214ENST00000572579 CCDC168Q8NDH2 2452 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 UGDHO60701 494 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 TOXO94900 526 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ACSL3O95573 720 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ENDOUP21128 410 aaKnown RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 SERPINB8P50452 374 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ARFIP1P53367 373 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 SLC37A1P57057 533 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 NUP107P57740 925 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 HERVK_113P63132 956 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ERVK-8P63133 956 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 PMPCAQ10713 525 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 TRAF3Q13114 568 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ZNF267Q14586 743 aaPredicted RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 OPN5Q6U736 354 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 TMEM64Q6YI46 380 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ST13P4Q8IZP2 240 aaPredicted RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 MMGT1Q8N4V1 131 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 LILRB4Q8NHJ6 448 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ERVK-6Q9BXR3 956 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 SACM1LQ9NTJ5 587 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 TEX10Q9NXF1 929 aaPredicted RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 PHF11Q9UIL8 331 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 ERVK-19Q9WJR5 959 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 FAM215AQ9Y5M1 114 aa16.7■□□□□ 0.26
CHD3-214ENST00000572579 CHCHD2Q9Y6H1 151 aaPredicted RBP16.7■□□□□ 0.26
CHD3-214ENST00000572579 DNAJC13O75165 2243 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 CELSR1Q9NYQ6 3014 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 ATP6AP2A0A1C7CYW4 349 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 NKX2-6A6NCS4 301 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 LRRC3CA6NJW4 275 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 ATP6AP2O75787 350 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 FBXO45P0C2W1 286 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 CT62P0C5K7 136 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 ELAVL4P26378 380 aaKnown RBP16.69■□□□□ 0.26
CHD3-214ENST00000572579 SOX18P35713 384 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 RGS9BPQ6ZS82 235 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 FAM47EQ6ZV65 393 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms