RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TPM1P09493 284 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 IQCF3P0C7M6 154 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ANXA8P13928 327 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CKMT2P17540 419 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CEBPBP17676 345 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CDH3P22223 829 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ELAVL4P26378 380 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 GJB2P29033 226 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PTPN4P29074 926 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CCR1P32246 355 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 OR1D2P34982 312 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 SFTPDP35247 375 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CHI3L1P36222 383 aaPredicted RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 CCT6AP40227 531 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 SLC1A3P43003 542 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 NKX2-1P43699 371 aaPredicted RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 SLC1A6P48664 564 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TNFSF10P50591 281 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 THOP1P52888 689 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 LIMK2P53671 638 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ATP5IP56385 69 aaPredicted RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 RPS18P62269 152 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 CX3CL1P78423 397 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 NME3Q13232 169 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PDIA5Q14554 519 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TRIP10Q15642 601 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 STX1AQ16623 288 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CA9Q16790 459 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PHKG1Q16816 387 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 HADHQ16836 314 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 ADPRMQ3LIE5 342 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 UGT3A2Q3SY77 523 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ZC2HC1CQ53FD0 456 aaPredicted RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 AGKQ53H12 422 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ARMCX4Q5H9R4 360 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PHYHD1Q5SRE7 291 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 NDUFAF5Q5TEU4 345 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ATF7IP2Q5U623 682 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ANXA8L1Q5VT79 327 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PRAMEF20Q5VT98 475 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 IL23RQ5VWK5 629 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 SUSD4Q5VX71 490 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ZNF790Q6PG37 636 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 RBMS3Q6XE24 437 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 OTUD6AQ7L8S5 288 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 EFL1Q7Z2Z2 1120 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 TMEM139Q8IV31 216 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TDHQ8IZJ6 230 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 LRRC43Q8N309 656 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PDCL2Q8N4E4 241 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 KLHDC1Q8N7A1 406 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 BCORP1Q8N888 145 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FAM133AQ8N9E0 248 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PPFIBP2Q8ND30 876 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 BHLHE23Q8NDY6 225 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 OR2T3Q8NH03 318 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ZNF671Q8TAW3 534 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PNPT1Q8TCS8 783 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 RNF128Q8TEB7 428 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 RAPGEF5Q92565 580 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 SEPT8Q92599 483 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 C4orf36Q96KX1 117 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FAM20AQ96MK3 541 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FOXN4Q96NZ1 517 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 GSDMAQ96QA5 445 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 SLC22A12Q96S37 553 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PCDHB18PQ96TA0 734 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 KRT12Q99456 494 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FUNDC2Q9BWH2 189 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 FTHL17Q9BXU8 183 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 LRRC2Q9BYS8 371 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 GPR61Q9BZJ8 451 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 NMNAT2Q9BZQ4 307 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 MIS12Q9H081 205 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 WWP1Q9H0M0 922 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 DPEP3Q9H4B8 488 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 CLSTN2Q9H4D0 955 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 BICC1Q9H694 974 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 METTL7AQ9H8H3 244 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 WDR76Q9H967 626 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 MRPL17Q9NRX2 175 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 ETNK2Q9NVF9 386 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 HYPKQ9NX55 129 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 RAB20Q9NX57 234 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 KLHL9Q9P2J3 617 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 SLC12A6Q9UHW9 1150 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 TP53TG3Q9ULZ0 132 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 MRPS33Q9Y291 106 aaKnown RBP2.03□□□□□ -2.08
SRP54-204ENST00000553923 PYGO1Q9Y3Y4 419 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 YIPF1Q9Y548 306 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 KLK4Q9Y5K2 254 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 ZHX2Q9Y6X8 837 aa2.03□□□□□ -2.08
SRP54-204ENST00000553923 PRAG1Q86YV5 1406 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 SF3B1O75533 1304 aaKnown RBP eCLIP2.02□□□□□ -2.09
SRP54-204ENST00000553923 TRAV18A0A075B6X5 111 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 SERTM2A0A1B0GWG4 89 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 ARHGEF35A5YM69 484 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 OR5K3A6NET4 321 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 MFSD2BA6NFX1 497 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 C15orf62A8K5M9 175 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms