RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RNF144AP50876 292 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 DSTNP60981 165 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ALDH6A1Q02252 535 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 RUNX1T1Q06455 604 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 NDUFA5Q16718 116 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPAT3Q53EU6 434 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLEKHS1Q5SXH7 462 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 METTL2BQ6P1Q9 378 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 LHFPL3Q86UP9 236 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM20CQ8IXL6 584 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 KLHL6Q8WZ60 621 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 EXOSC8Q96B26 276 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ECHDC3Q96DC8 303 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 LRR1Q96L50 414 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 NELL2Q99435 816 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCDC32Q9BV29 185 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 DMRT3Q9NQL9 472 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 THSD1Q9NS62 852 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 SEMA3GQ9NS98 782 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 NLKQ9UBE8 527 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 TCF20Q9UGU0 1960 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 KIAA1671Q9BY89 1806 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 SHISA3A0PJX4 238 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 FEZF1A0PJY2 475 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRAMEF27A3QJZ7 478 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCDC182A6NF36 153 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF670-ZNF695F2Z2N8 137 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PSIP1O75475 530 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 MPC1LP0DKB6 136 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 CSTF2P33240 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PCBP3P57721 371 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 EFR3AQ14156 821 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 LRRC32Q14392 662 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 SPDYE7PQ495Y7 208 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PDZK1Q5T2W1 519 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM215Q68D42 235 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 TYW3Q6IPR3 259 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 UNC5DQ6UXZ4 953 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 RNF180Q86T96 592 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ADGRF3Q8IZF5 1079 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 YIPF7Q8N8F6 280 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PCSK9Q8NBP7 692 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 CLIP3Q96DZ5 547 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM80Q96HE8 168 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 RPRD1BQ9NQG5 326 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 GIMAP4Q9NUV9 329 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 HCFC1R1Q9NWW0 138 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 STOML2Q9UJZ1 356 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 DOCK9Q9BZ29 2069 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 C2orf92A0A1B0GVN3 265 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 A0A1W2PS29 197 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GSAPA4D1B5 854 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HPGDSO60760 199 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 PQBP1O60828 265 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GPR37L1O60883 481 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ARAFP10398 606 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CTSAP10619 480 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 PSMB5P28074 263 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 PRKAG1P54619 331 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 RAB8AP61006 207 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TIMM50Q3ZCQ8 353 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CRTC2Q53ET0 693 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SMUG1Q53HV7 270 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 PGBD2Q6P3X8 592 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRIM40Q6P9F5 258 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 IL20RBQ6UXL0 311 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CASP12Q6UXS9 341 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF783Q6ZMS7 281 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CCDC149Q6ZUS6 474 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 NOXA1Q86UR1 476 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 BMPERQ8N8U9 685 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR52I1Q8NGK6 324 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR2A12Q8NGT7 310 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ART5Q96L15 291 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 F2RL3Q96RI0 385 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 LYSMD1Q96S90 227 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HDHD5Q9BXW7 423 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SERHL2Q9H4I8 314 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 STUB1Q9UNE7 303 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 KCNE2Q9Y6J6 123 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 MN1Q10571 1320 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HYKKA2RU49 373 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 MANSC4A6NHS7 340 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 C5orf58C9J3I9 102 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CTSLP07711 333 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SELPP16109 830 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 RHCEP18577 417 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 DDOSTP39656 456 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF750Q32MQ0 723 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GLYR1Q49A26 553 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SPIN4Q56A73 249 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 IQCHQ86VS3 1027 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRAPPC5Q8IUR0 188 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC30A8Q8IWU4 369 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms