RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 OR4D6Q8NGJ1 314 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 DPF3Q92784 378 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CACNA1AO00555 2505 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PPP1R2P9O14990 202 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 T-ENOLP0DO92 83 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 AKT2P31751 481 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 DGKGP49619 791 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CEACAM7Q14002 265 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 BCL2A1Q16548 175 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 FAM182AQ5T1J6 154 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SLC22A15Q8IZD6 547 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CADM3Q8N126 398 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PARP16Q8N5Y8 322 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CXorf40AQ8TE69 158 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TFAP2BQ92481 460 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TFAP2CQ92754 450 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 C16orf58Q96GQ5 468 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 DNMT3LQ9UJW3 386 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 ATG4BQ9Y4P1 393 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PCDHGB7Q9Y5F8 929 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MAGED1Q9Y5V3 778 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TARBP1Q13395 1621 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 A6NIN4 97 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SHMT1P34896 483 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MMP12P39900 470 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SF3A2Q15428 464 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 FAM171A1Q5VUB5 890 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SHFQ7M4L6 423 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 GID4Q8IVV7 300 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 GPRC5AQ8NFJ5 357 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 NANPQ8TBE9 248 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PXYLP1Q8TE99 480 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MYRFLQ96LU7 910 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 RNF32Q9H0A6 362 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 ASB7Q9H672 318 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 METTL17Q9H7H0 456 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CREBZFQ9NS37 354 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 VPS29Q9UBQ0 182 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 PURGQ9UJV8 347 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 TREHO43280 583 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 ALX3O95076 343 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 RCBTB2O95199 551 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MS4A2Q01362 244 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MLLT1Q03111 559 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-215ENST00000537824 CDK5R2Q13319 367 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 OR51G2Q8NGK0 314 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 SLC6A5Q9Y345 797 aa5.45□□□□□ -1.54
CSMD1-215ENST00000537824 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ENPP3O14638 875 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 SDC3O75056 442 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ATG13O75143 517 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 INHAP05111 366 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 PITPNBP48739 271 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ABHD18Q0P651 414 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 OLIG2Q13516 323 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 PTPRRQ15256 657 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 SIGIRRQ6IA17 410 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 LINC00471Q8N535 108 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GLIS1Q8NBF1 620 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 CCDC74BQ96LY2 380 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 TWNKQ96RR1 684 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 OR51E2Q9H255 320 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GPN2Q9H9Y4 310 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 HEBP1Q9NRV9 189 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 HELZP42694 1942 aaKnown RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 UNC119BA6NIH7 251 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 SLC35G4P0C7Q5 338 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 TGFB3P10600 412 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 HLA-EP13747 358 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 PYCR1P32322 319 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF136P52737 540 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 FLI1Q01543 452 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GRB7Q14451 532 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 LY6KQ17RY6 165 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 SDHAF4Q5VUM1 108 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 FAM205BPQ63HN1 556 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 LCLAT1Q6UWP7 414 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 TSPEARQ8WU66 669 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GTF3C2Q8WUA4 911 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 MUL1Q969V5 352 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ZDHHC15Q96MV8 337 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 DPYSL5Q9BPU6 564 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GBA2Q9HCG7 927 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 SDHDO14521 159 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 CTHP32929 405 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 OR1E2P47887 323 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 FABP6P51161 128 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 INHBCP55103 352 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 GRM2Q14416 872 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 NFIXQ14938 502 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF792Q3KQV3 632 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 EEF1DP3Q658K8 133 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD1-215ENST00000537824 DNAAF1Q8NEP3 725 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 KCNN1Q92952 543 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 KLHL15Q96M94 604 aa5.44□□□□□ -1.54
CSMD1-215ENST00000537824 NECTIN4Q96NY8 510 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms