RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 A0A0U1RQS6 177 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SH3D21A4FU49 640 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 PRR19A6NJB7 356 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 PTGES3LE9PB15 166 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 GFYI3L273 518 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 YY2O15391 372 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SEMA3DO95025 777 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 PGLSO95336 258 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 CLDN9O95484 217 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 PDYNP01213 254 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 RPLP0P05388 317 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 LCKP06239 509 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 ADRA2AP08913 450 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SDC1P18827 310 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 MALP21145 153 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 ITGB7P26010 798 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 ACRV1P26436 265 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 S100A3P33764 101 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 MVDP53602 400 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 RPL38P63173 70 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 IL5RAQ01344 420 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 TLE1Q04724 770 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 LRRC74AQ0VAA2 488 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 FOXO1Q12778 655 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 EFEMP1Q12805 493 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 CSTF3Q12996 717 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 GPR17Q13304 367 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 DNASE1L3Q13609 305 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SF3B4Q15427 424 aaKnown RBP eCLIP3.74□□□□□ -1.81
CLTC-209ENST00000498711 TAF12Q16514 161 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 TRIM60Q495X7 471 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 GPR33Q49SQ1 333 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 FBXO48Q5FWF7 155 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SLC25A30Q5SVS4 291 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 CCNJQ5T5M9 372 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 NEK5Q6P3R8 708 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 SLC22A15Q8IZD6 547 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 RBFAQ8N0V3 343 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 OR7D4Q8NG98 312 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 WDR20Q8TBZ3 569 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 IFI44Q8TCB0 444 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 RPL3LQ92901 407 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 MRGPRX1Q96LB2 322 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 RPRD1AQ96P16 312 aaPredicted RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 SOSTQ9BQB4 213 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 THUMPD3Q9BV44 507 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 CINPQ9BW66 212 aaPredicted RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 SYNDIG1Q9H7V2 258 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 FARSBQ9NSD9 589 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 SPATA6Q9NWH7 488 aaPredicted RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 FAM120CQ9NX05 1096 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 WARS2Q9UGM6 360 aaKnown RBP3.74□□□□□ -1.81
CLTC-209ENST00000498711 DLGAP4Q9Y2H0 992 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 ACTL7AQ9Y615 435 aa3.74□□□□□ -1.81
CLTC-209ENST00000498711 A0A1W2PR48 441 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 MYADML2A6NDP7 307 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 NCF1BA6NI72 391 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 NCF1CA8MVU1 366 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 F5H5T6 163 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 F8W810 466 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 H0Y626 953 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 H3BQ06 376 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 M0QZ92 97 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 SYT5O00445 386 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 GNGT2O14610 69 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 TOR1BO14657 336 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 STX7O15400 261 aaKnown RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 HOXC11O43248 304 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 FAM20BO75063 409 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 TRIM16O95361 564 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 PRAMEF12O95522 483 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 TBX18O95935 607 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 LGI1O95970 557 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 PIRTP0C851 137 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 ZNF7P17097 686 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 DDX5P17844 614 aaKnown RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 ATF6P18850 670 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 PRPS1L1P21108 318 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 NR4A1P22736 598 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 PPIBP23284 216 aaKnown RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 GADD45AP24522 165 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 EPHA2P29317 976 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 RGS4P49798 205 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 SNRPGP62308 76 aaKnown RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 IL13RA1P78552 427 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 HTRA4P83105 476 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 BEX3Q00994 111 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 RHAGQ02094 409 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 SP140Q13342 867 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 KCNC3Q14003 757 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 SMN1Q16637 294 aaKnown RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 CLLU1OSQ5K130 101 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 TPRG1LQ5T0D9 272 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 LRRC66Q68CR7 880 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 CNKSR3Q6P9H4 555 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 LIPIQ6XZB0 460 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 Q6ZVL8 140 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 AKAP14Q86UN6 197 aa3.73□□□□□ -1.81
CLTC-209ENST00000498711 CIR1Q86X95 450 aaPredicted RBP3.73□□□□□ -1.81
CLTC-209ENST00000498711 SNX29P2Q8IUI4 249 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms