RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 GABRR3A8MPY1 467 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 A8MUA0 341 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 BTN3A3O00478 584 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 PROM1O43490 865 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 GBAP04062 536 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 PIPP12273 146 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CCR2P41597 374 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ERVFC1P60507 584 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 RGNQ15493 299 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TIGD4Q8IY51 512 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 AQP11Q8NBQ7 271 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 SLC25A19Q9HC21 320 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CFAP97Q9P2B7 532 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ACSL6Q9UKU0 697 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TMCC3Q9ULS5 477 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CCDC88CQ9P219 2028 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LOC102723532A0A0G2JNH3 316 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 PLOD3O60568 738 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CXCL14O95715 111 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LGI1O95970 557 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 IL1AP01583 271 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 AOAHP28039 575 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 SDC2P34741 201 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CAV3P56539 151 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CLDN20P56880 219 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 SRSF11Q05519 484 aaKnown RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TSTA3Q13630 321 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CDKN3Q16667 212 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LAS2Q8IYD9 372 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 Q8N402 240 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 HYLS1Q96M11 299 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 B3GAT2Q9NPZ5 323 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 SNX11Q9Y5W9 270 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ATF4P18848 351 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 LHCGRP22888 699 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PCGF2P35227 344 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SOX9P48436 509 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 CRISP1P54107 249 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 EPHB3P54753 998 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PRMT2P55345 433 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PER3P56645 1201 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 P2RY14Q15391 338 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 IFI44LQ53G44 452 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MZT2BQ6NZ67 158 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 WDR53Q7Z5U6 358 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 KCTD20Q7Z5Y7 419 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SYT14Q8NB59 555 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SLC37A3Q8NCC5 494 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MED8Q96G25 268 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MAPKAP1Q9BPZ7 522 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ACER3Q9NUN7 267 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ZDHHC3Q9NYG2 299 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ELF5Q9UKW6 265 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 YARS2Q9Y2Z4 477 aaKnown RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 KNL1Q8NG31 2342 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 OR2AG2A6NM03 316 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 LRRTM2O43300 516 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 LYRM1O43325 122 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 MPZL2O60487 215 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SOX14O95416 240 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 GASTP01350 101 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 OR56A5P0C7T3 313 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PRKAR1AP10644 381 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SYN1P17600 705 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 CD22P20273 847 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 NTHL1P78549 312 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ABATP80404 500 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 IRF8Q02556 426 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF267Q14586 743 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 UAP1L1Q3KQV9 507 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 FLYWCH1Q4VC44 716 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF628Q5EBL2 1059 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 LYPLAL1Q5VWZ2 237 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 FRMPD2BQ6IN97 320 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ANKRD54Q6NXT1 300 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 FAM180BQ6P0A1 224 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 CLDN22Q8N7P3 220 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 OR2AP1Q8NGE2 309 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 OR5AK3PQ8NH89 298 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 CSGALNACT1Q8TDX6 532 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 PCNPQ8WW12 178 aaKnown RBP13.6□□□□□ -0.23
COL9A2-207ENST00000482722 KLHL6Q8WZ60 621 aa13.6□□□□□ -0.23
COL9A2-207ENST00000482722 SCAMP4Q969E2 229 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms