RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 TMEM56-RWDD3S4R434 201 aa4.71□□□□□ -1.65
RC3H1-202ENST00000367694 COL5A2P05997 1499 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 SLC35F4A4IF30 521 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NPIPB9F8W1W9 429 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MMP20O60882 483 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FZD7O75084 574 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 GJB3O75712 270 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 AKAP3O75969 853 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 C6orf47O95873 294 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 GLUD1P00367 558 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 LALBAP00709 142 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 PIGRP01833 764 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MYL2P10916 166 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 UBA1P22314 1058 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 HTR1BP28222 390 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FMO3P31513 532 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NAA10P41227 235 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MAGEA6P43360 314 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 IDH3GP51553 393 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TDGF1P3P51864 188 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ZNF143P52747 638 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 DEFA1P59665 94 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 DEFA3P59666 94 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 GTF2H3Q13889 308 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 SCARF1Q14162 830 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 CHI3L2Q15782 390 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ATP6AP1Q15904 470 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 HLFQ16534 295 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TATDN3Q17R31 274 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 AVPI1Q5T686 147 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 C1orf94Q6P1W5 598 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NXPE4Q6UWF7 544 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ALKAL1Q6UXT8 129 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 CCDC190Q86UF4 302 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 SLC22A15Q8IZD6 547 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 UXS1Q8NBZ7 420 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 PSMG2Q969U7 264 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 RAB3CQ96E17 227 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NUDT11Q96G61 164 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 PEX11GQ96HA9 241 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 IGSF21Q96ID5 467 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 RPL10LQ96L21 214 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 RHOVQ96L33 236 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ERGIC2Q96RQ1 377 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MYOCQ99972 504 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NIPSNAP1Q9BPW8 284 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 BCO2Q9BYV7 579 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 CCDC90BQ9GZT6 254 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FAM83DQ9H4H8 585 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FBXO44Q9H4M3 255 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ZFP64Q9NPA5 681 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 C11orf16Q9NQ32 467 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NCDNQ9UBB6 729 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ADAM30Q9UKF2 790 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 PRSS21Q9Y6M0 314 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 SLC22A31A6NKX4 558 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 GRID2O43424 1007 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 KRT33AO76009 404 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 HOXC6P09630 235 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 OR8U8P0C7N1 319 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MAS1LP35410 378 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NRIP1P48552 1158 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NT5C2P49902 561 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ARSEP51690 589 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 RAB25P57735 213 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 EMX2Q04743 252 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 SRSF5Q13243 272 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 CDH18Q13634 790 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 USF2Q15853 346 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NTRK3Q16288 839 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 INTS6LQ5JSJ4 861 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 NBPF12Q5TAG4 269 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 C16orf46Q6P387 395 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 BLOC1S3Q6QNY0 202 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ZNF551Q7Z340 670 aaPredicted RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FGD2Q7Z6J4 655 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 DDIASQ8IXT1 998 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 OR2T4Q8NH00 348 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 OR5R1Q8NH85 324 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 LARP4BQ92615 738 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MALSU1Q96EH3 234 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TPD52L3Q96J77 140 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 PRAP1Q96NZ9 151 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 CMSS1Q9BQ75 279 aaKnown RBP4.71□□□□□ -1.66
RC3H1-202ENST00000367694 FKRPQ9H9S5 495 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MMP25Q9NPA2 562 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 ARHGAP20Q9P2F6 1191 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TRPC4Q9UBN4 977 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TSPAN16Q9UKR8 245 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 STUB1Q9UNE7 303 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 MTCH2Q9Y6C9 303 aa4.71□□□□□ -1.66
RC3H1-202ENST00000367694 TCRBV21S2A2A0A5A6 115 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 SDR42E2A6NKP2 422 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 BTN3A3O00478 584 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 SOCS6O14544 535 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 ACOT8O14734 319 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 SLC28A2O43868 658 aa4.7□□□□□ -1.66
RC3H1-202ENST00000367694 NPHS1O60500 1241 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms