RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 DAOAP59103 153 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 MEDAGQ5VYS4 303 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ALG1LQ6GMV1 187 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 C5orf46Q6UWT4 87 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 FAM196AQ6ZSG2 479 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 LIMS2Q7Z4I7 341 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 MCATQ8IVS2 390 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 AQP11Q8NBQ7 271 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PLA2G15Q8NCC3 412 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 DOHHQ9BU89 302 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 TSSK6Q9BXA6 273 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 SEMA4CQ9C0C4 833 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 LATS2Q9NRM7 1088 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 SLC22A11Q9NSA0 550 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PARP14Q460N5 1801 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 A0A0G2JPF8 293 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 HNRNPCL3B7ZW38 293 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 D6RAR5 112 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 TLR4O00206 839 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 GUCA1CO95843 209 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ZNF806P0C7X5 589 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 HNRNPCL4P0DMR1 293 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 GPX2P18283 190 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ETV5P41161 510 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 KCNJ3P48549 501 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 CDKN1CP49918 316 aaPredicted RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 CCR6P51684 374 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ZXDBP98169 803 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
IFT88-202ENST00000351808 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 PAN3Q58A45 887 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 MANEALQ5VSG8 457 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ZDHHC1Q8WTX9 485 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 C10orf90Q96M02 699 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 MAPKAP1Q9BPZ7 522 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 NMUR1Q9HB89 426 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 NEU3Q9UQ49 428 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 NUBP2Q9Y5Y2 271 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 SLC22A7Q9Y694 548 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 NINQ8N4C6 2090 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 EIF1BO60739 113 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 NDUFS3O75489 264 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 GJB3O75712 270 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 GASTP01350 101 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 MMP2P08253 660 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ALPIP09923 528 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 H2AFB2P0C5Z0 115 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 ACPPP15309 386 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 IL2P60568 153 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 IL10RBQ08334 325 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 PLD1Q13393 1074 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 JAZF1Q86VZ6 243 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 KCNJ9Q92806 393 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 DNTTIP1Q9H147 329 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 SF3B6Q9Y3B4 125 aaKnown RBP12.62□□□□□ -0.39
IFT88-202ENST00000351808 PCDHB7Q9Y5E2 793 aa12.62□□□□□ -0.39
IFT88-202ENST00000351808 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 FAM227AF5H4B4 570 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 SOX14O95416 240 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GLUD1P00367 558 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 AHCYP23526 432 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 PREPP48147 710 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 RIPPLY1Q0D2K3 151 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 SLC10A7Q0GE19 358 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GANABQ14697 944 aaKnown RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 QSOX2Q6ZRP7 698 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 RAB11FIP2Q7L804 512 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 SHFQ7M4L6 423 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 OR6S1Q8NH40 331 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 OR1S1Q8NH92 325 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GATAD2BQ8WXI9 593 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
IFT88-202ENST00000351808 CACNG6Q9BXT2 260 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 ASB4Q9Y574 426 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms