RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Olfr659Q8VGV6 322 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Spef1Q99JL1 234 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ncbp2Q9CQ49 156 aaKnown RBP9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mgme1Q9CXC3 338 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Prdm5Q9CXE0 599 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Uqcrc1Q9CZ13 480 aaKnown RBP9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Twist2Q9D030 160 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Eef1e1Q9D1M4 174 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr671A0A1B0GSN5 317 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm3099J3QPA5 205 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Bcl2a1dO55179 172 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dmp1O55188 503 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Abcb1aP21447 1276 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Acvr2aP27038 513 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Adra2bP30545 450 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Rln1P47932 185 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Lhx3P50481 400 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Myadml2Q08AU7 307 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Hexim2Q3TVI4 313 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 CcnjQ3TZI6 379 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 C2cd4cC2CD4Q5HZI2 419 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Nfatc2Q60591 927 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Znf750Q8BH05 703 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Plekhs1Q8BW88 474 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fbxl8Q8CIG9 374 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zc3h10Q8R205 435 aaKnown RBP9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ndc1Q8VCB1 673 aaKnown RBP9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr722Q8VFC8 308 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc3a1Q91WV7 685 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mto1Q923Z3 669 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ripply3Q924S9 152 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 9030624G23RikQ9D308 155 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc22a17Q9D9E0 401 aa9.54□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr1215A3KGY3 312 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr520E9Q518 316 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 P04214 136 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gpd1P13707 349 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Neurog1P70660 244 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Alg6Q3TAE8 507 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zfp791Q497V9 528 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zfp184Q7TSH9 737 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc2a12Q8BFW9 622 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Sdhaf3Q8BQU3 125 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 ManbaQ8K2I4 879 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 NrmQ8VC65 262 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr701Q9D3U9 316 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc38a3Q9DCP2 505 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Sppl2aQ9JJF9 523 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Lmx1aQ9JKU8 382 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Stub1Q9WUD1 304 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Armc4B2RY50 1037 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm597E9Q8J5 896 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Rhox2hK7N6P1 191 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cd40lgP27548 260 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tia1P52912 386 aaKnown RBP9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 SiaeP70665 541 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fam117bQ3U3E2 584 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cdk15Q3V3A1 433 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Nlrc3Q5DU56 1064 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 IpmkQ7TT16 396 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zbtb26Q8C8S0 451 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 FggQ8VCM7 436 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 1700080O16RikQ9D9G4 284 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tysnd1Q9DBA6 568 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cldn19Q9ET38 224 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Togaram1Q6A070 1776 aaKnown RBP9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zfp282E9PVC2 666 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Vmn2r116E9Q6I0 856 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gp1baO35930 734 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zp2P20239 713 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cyp17a1P27786 507 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ephx2P34914 554 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Sesn1P58006 492 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mrps6P58064 125 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Il11ra2P70225 432 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Nos3P70313 1202 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ikzf2P81183 526 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 UradQ283N4 178 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Pdp1Q3UV70 538 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gpr17Q6NS65 339 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr1045Q7TR80 315 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Kirrel2Q7TSU7 700 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Reps2Q80XA6 521 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Vmn2r81Q80Z09 865 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc36a2Q8BHK3 478 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cxcl16Q8BSU2 246 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gpr158Q8C419 1200 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Grsf1Q8C5Q4 479 aaKnown RBP9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Clrn1Q8K445 232 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Col26a1Q91VF6 440 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Arl4dQ99PE9 201 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cyp11a1Q9QZ82 526 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Igf2rQ07113 2483 aaKnown RBP9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 SisF8VQM5 1818 aa9.53□□□□□ -0.88
Ldlr-201ENSMUST00000034713 1700028J19RikA0A0U1RP08 172 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm5788A0A1Y7VK80 144 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr1306A2BFL7 312 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ldlrad1D3YYZ1 218 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Prdm14E9Q3T6 561 aa9.52□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Vmn2r10K7N621 847 aa9.52□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms