RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PNPOQ9NVS9 261 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 THAP1Q9NVV9 213 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 C1orf109Q9NX04 203 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 VTI1BQ9UEU0 232 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 DLGAP4Q9Y2H0 992 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 PCDHA9Q9Y5H5 950 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 COL6A6A6NMZ7 2263 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 A6NL46 340 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 IL3P08700 152 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 TACR1P25103 407 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 GPR143P51810 404 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 HK2P52789 917 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 TAS2R50P59544 299 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF763Q0D2J5 394 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 NR6A1Q15406 480 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 NOXRED1Q6NXP6 359 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 DGAT2L6Q6ZPD8 337 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 APCDD1LQ8NCL9 501 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 C16orf78Q8WTQ4 265 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 TANKQ92844 425 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 METTL2AQ96IZ6 378 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 EGLN2Q96KS0 407 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 LPAR4Q99677 370 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ARHGAP9Q9BRR9 750 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 TUBD1Q9UJT1 453 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 PPIEQ9UNP9 301 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 EXO1Q9UQ84 846 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 PCDHGA9Q9Y5G4 932 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 GNG14A0A1W2PPG7 69 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 C1orf226A1L170 272 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 A8MUA0 341 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 SEC22BO75396 215 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ANXA4P09525 319 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ITGAMP11215 1152 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 NR1D1P20393 614 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ITGA3P26006 1051 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 TLX1P31314 330 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 SLC26A5P58743 744 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 RPL38P63173 70 aaKnown RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 STX4Q12846 297 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 MYBPC3Q14896 1274 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 TERF2Q15554 542 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 PDCD2Q16342 344 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ATG16L1Q676U5 607 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 OR52E8Q6IFG1 317 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 FAM180BQ6P0A1 224 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 FAM76AQ8TAV0 307 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 THOC3Q96J01 351 aaKnown RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ZBTB20Q9HC78 741 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ADAP2Q9NPF8 381 aa13.38□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF223Q9UK11 482 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-217ENST00000621474 SPTA1P02549 2419 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 MKRN2OSH3BPM6 223 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 MYO1DO94832 1006 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 GPR75O95800 540 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SERPINA7P05543 415 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SDC1P18827 310 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SOX18P35713 384 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 STT3AP46977 705 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 DUSP2Q05923 314 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SERTAD2Q14140 314 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
CBWD3-217ENST00000621474 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 GALNTL6Q49A17 601 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 TRIM42Q8IWZ5 723 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 BRIX1Q8TDN6 353 aaKnown RBP13.37□□□□□ -0.27
CBWD3-217ENST00000621474 ELP5Q8TE02 316 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 PPP1R36Q96LQ0 422 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 CCT7Q99832 543 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SLC25A23Q9BV35 468 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 LHPPQ9H008 270 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 PNO1Q9NRX1 252 aaKnown RBP13.37□□□□□ -0.27
CBWD3-217ENST00000621474 INTS9Q9NV88 658 aaKnown RBP13.37□□□□□ -0.27
CBWD3-217ENST00000621474 GPR83Q9NYM4 423 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
CBWD3-217ENST00000621474 ATP8B1O43520 1251 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 PEX11AO75192 247 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 SOWAHCQ53LP3 525 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-217ENST00000621474 C6orf136Q5SQH8 315 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 FAM71E1Q6IPT2 247 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 TCTN3Q6NUS6 607 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 MAVSQ7Z434 540 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 KIF2BQ8N4N8 673 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 M1APQ8TC57 530 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 PPWD1Q96BP3 646 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms