RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 RHEBL1Q8TAI7 183 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 CA5BP1Q8WTZ4 195 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 DAZLQ92904 295 aaKnown RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 NCLNQ969V3 563 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 SDCCAG3Q96C92 435 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 F2RL3Q96RI0 385 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 ATOH8Q96SQ7 321 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 GPATCH1Q9BRR8 931 aaKnown RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TBCDQ9BTW9 1192 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 MS4A8Q9BY19 250 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 LYRM4Q9HD34 91 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 KCNN3Q9UGI6 736 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 FBXW2Q9UKT8 454 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 MEMO1Q9Y316 297 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 CLCA3PQ9Y6N3 262 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 ARID1AO14497 2285 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 NKX2-6A6NCS4 301 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 NPIPA5E9PKD4 350 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 KLRC4-KLRK1H3BQV0 150 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 UBXN8O00124 270 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CYR61O00622 381 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CTNSO60931 367 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ZFAND5O76080 213 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 IFNA16P05015 189 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 PCNAP12004 261 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 EPB42P16452 691 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 EPORP19235 508 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 MSX1P28360 303 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 RBMXP38159 391 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ST13P50502 369 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 HNRNPFP52597 415 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 GUCY2DQ02846 1103 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 PCDH1Q08174 1060 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 STX4Q12846 297 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 DLG1Q12959 904 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 SERTAD2Q14140 314 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 TRADDQ15628 312 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 AP5B1Q2VPB7 878 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF468Q5VIY5 522 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ADNP2Q6IQ32 1131 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 KLC3Q6P597 504 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 LAS2Q8IYD9 372 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CYP4Z2PQ8N1L4 340 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 GHDCQ8N2G8 530 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF473Q8WTR7 871 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CMTM7Q96FZ5 175 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 CENPKQ9BS16 269 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 TSPYL1Q9H0U9 437 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 PRDM7Q9NQW5 492 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 MTRF1LQ9UGC7 380 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ADGRE2Q9UHX3 823 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 NPIPA1Q9UND3 350 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 YARS2Q9Y2Z4 477 aaKnown RBP10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ANGPTL3Q9Y5C1 460 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 NCKAP5O14513 1909 aa10.34□□□□□ -0.75
CCDC47-206ENST00000584112 ESYT3A0FGR9 886 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ASNA1O43681 348 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ITGA10O75578 1167 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SCELO95171 688 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ATE1O95260 518 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 GFAPP14136 432 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ABOP16442 354 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 HIST1H1TP22492 207 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SSR2P43308 183 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SERPINB8P50452 374 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SSR4P51571 173 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 GPR143P51810 404 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 PHEXP78562 749 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SLC7A5Q01650 507 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 BIKQ13323 160 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 BMPR2Q13873 1038 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 MROH9Q5TGP6 573 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 GRHL2Q6ISB3 625 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 Q6ZPB1 254 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-206ENST00000584112 CLNKQ7Z7G1 428 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF227Q86WZ6 799 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SPPL2CQ8IUH8 684 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SIAH3Q8IW03 269 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 GPALPP1Q8IXQ4 340 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 CENPLQ8N0S6 344 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-206ENST00000584112 EID3Q8N140 333 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 CPSF7Q8N684 471 aaKnown RBP10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ACOT4Q8N9L9 421 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 MORN4Q8NDC4 146 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 TMEM52Q8NDY8 209 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 OR7G3Q8NG95 312 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 OR14A16Q8NHC5 309 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 NXNL1Q96CM4 212 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 REPS1Q96D71 796 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 CSF3RQ99062 836 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ALOXE3Q9BYJ1 711 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 TSPAN10Q9H1Z9 355 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-206ENST00000584112 TIMMDC1Q9NPL8 285 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 SNX15Q9NRS6 342 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ZDHHC18Q9NUE0 388 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms