RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 WWOXQ9NZC7 414 aa19.65■□□□□ 0.74
SSH3-211ENST00000534112 PCDHGB3Q9Y5G1 929 aa19.65■□□□□ 0.74
SSH3-211ENST00000534112 HSPB2A8KAH6 182 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 COX7A2P14406 83 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 HSPA7P48741 367 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 KCNJ2P63252 427 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 HSPB2Q16082 182 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 LYPD8Q6UX82 237 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 CDC20BQ86Y33 519 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 ANKMY2Q8IV38 441 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 OR4N5Q8IXE1 308 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 C9orf40Q8IXQ3 194 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 ULK2Q8IYT8 1036 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 SPATA6LQ8N4H0 392 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 SNX31Q8N9S9 440 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 GOT1L1Q8NHS2 421 aaPredicted RBP19.64■□□□□ 0.73
SSH3-211ENST00000534112 SLC22A8Q8TCC7 542 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 EFCAB11Q9BUY7 163 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 POPDC3Q9HBV1 291 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 ACKR4Q9NPB9 350 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 DLL4Q9NR61 685 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 MOCS1Q9NZB8 636 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 BOKQ9UMX3 212 aaPredicted RBP19.64■□□□□ 0.73
SSH3-211ENST00000534112 SPACA6W5XKT8 324 aa19.64■□□□□ 0.73
SSH3-211ENST00000534112 A6NNC1 897 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 RTCAO00442 366 aaKnown RBP19.63■□□□□ 0.73
SSH3-211ENST00000534112 STK16O75716 305 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 FAM155BO75949 473 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 IGKV3-11P04433 115 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 STT3AP46977 705 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 HIST2H2ACQ16777 129 aaPredicted RBP19.63■□□□□ 0.73
SSH3-211ENST00000534112 PRAMEF20Q5VT98 475 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 HIST2H2AA3Q6FI13 130 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 GPSM1Q86YR5 675 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 LRRC25Q8N386 305 aaPredicted RBP19.63■□□□□ 0.73
SSH3-211ENST00000534112 FBXW8Q8N3Y1 598 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 RELL2Q8NC24 303 aaPredicted RBP19.63■□□□□ 0.73
SSH3-211ENST00000534112 C7orf57Q8NEG2 295 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 NEIL3Q8TAT5 605 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 FAM222BQ8WU58 562 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 SPACA9Q96E40 222 aaPredicted RBP19.63■□□□□ 0.73
SSH3-211ENST00000534112 ALPK1Q96QP1 1244 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 SLC6A15Q9H2J7 730 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 RHOJQ9H4E5 214 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 PROK2Q9HC23 129 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 DNHD1Q96M86 4753 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 EML6Q6ZMW3 1958 aa19.63■□□□□ 0.73
SSH3-211ENST00000534112 FLNAP21333 2647 aaKnown RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 LRRC3CA6NJW4 275 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 FGF17O60258 216 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 WISP3O95389 354 aaPredicted RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 FOSL1P15407 271 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 BMP5P22003 454 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 HIST1H1TP22492 207 aaPredicted RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 CPN2P22792 545 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 DGKQP52824 942 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 ARL4CP56559 192 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 IGLV3-21P80748 117 aaPredicted RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 TBL3Q12788 808 aaKnown RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 LAPTM5Q13571 262 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 PDK4Q16654 411 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 FLYWCH1Q4VC44 716 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 TMEM35AQ53FP2 167 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 PAGE2BQ5JRK9 111 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 CDKL4Q5MAI5 379 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 SULT1C3Q6IMI6 304 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 SLC15A4Q8N697 577 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 ZNF473Q8WTR7 871 aaKnown RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 PPWD1Q96BP3 646 aaKnown RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 DGAT2Q96PD7 388 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 SH3GL2Q99962 352 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 MCMBPQ9BTE3 642 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 MS4A8Q9BY19 250 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 TRMT1Q9NXH9 659 aaKnown RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 QPCTLQ9NXS2 382 aa19.62■□□□□ 0.73
SSH3-211ENST00000534112 RPH3AQ9Y2J0 694 aaPredicted RBP19.62■□□□□ 0.73
SSH3-211ENST00000534112 HRNRQ86YZ3 2850 aaPredicted RBP19.61■□□□□ 0.73
SSH3-211ENST00000534112 HRKO00198 91 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 CES2O00748 559 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 DVL2O14641 736 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 SCELO95171 688 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 EPORP19235 508 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 MSH2P43246 934 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 SLC12A2P55011 1212 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 ADAM8P78325 824 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 IRF8Q02556 426 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 CHIT1Q13231 466 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 TBCCQ15814 346 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 AP5B1Q2VPB7 878 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 DGAT2L6Q6ZPD8 337 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 NAXEQ8NCW5 288 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 OR10G3Q8NGC4 313 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 RNASE6Q93091 150 aaKnown RBP19.61■□□□□ 0.73
SSH3-211ENST00000534112 MBD6Q96DN6 1003 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 RBM18Q96H35 190 aaKnown RBP19.61■□□□□ 0.73
SSH3-211ENST00000534112 DMRT3Q9NQL9 472 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 CNIH4Q9P003 139 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 PTBP2Q9UKA9 531 aaKnown RBP19.61■□□□□ 0.73
SSH3-211ENST00000534112 CBLCQ9ULV8 474 aa19.61■□□□□ 0.73
SSH3-211ENST00000534112 SNX12Q9UMY4 172 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms