RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PGRMC2O15173 223 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 RGS14O43566 566 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SNNO75324 88 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 GUCY1B2O75343 617 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SNUPNO95149 360 aaKnown RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 ICAM2P13598 275 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 TAS2R50P59544 299 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 STX4Q12846 297 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SERTAD2Q14140 314 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 KIAA0040Q15053 153 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 TERF2Q15554 542 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 EXT1Q16394 746 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 LACTB2Q53H82 288 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 XKR7Q5GH72 579 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 VWA5B1Q5TIE3 1220 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 OR52E8Q6IFG1 317 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 DDIASQ8IXT1 998 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 FAM76AQ8TAV0 307 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 M1APQ8TC57 530 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 BRIX1Q8TDN6 353 aaKnown RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 C16orf78Q8WTQ4 265 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 PTPMT1Q8WUK0 201 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 METTL2AQ96IZ6 378 aaKnown RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 C3orf30Q96M34 536 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 ILKAPQ9H0C8 392 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SLC25A18Q9H1K4 315 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 WDR41Q9HAD4 459 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 LRTM1Q9HBL6 345 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 MMP25Q9NPA2 562 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 ADAP2Q9NPF8 381 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-214ENST00000533209 C1orf109Q9NX04 203 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 VTI1BQ9UEU0 232 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 CES1P1Q9UKY3 287 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 DLGAP4Q9Y2H0 992 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 SPTA1P02549 2419 aa11.21□□□□□ -0.61
SSBP3-214ENST00000533209 A0A1W2PS29 197 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 SEC22BO75396 215 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 MYO1DO94832 1006 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 GPR75O95800 540 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 PRB1P04280 392 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 IFNA16P05015 189 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 IL3P08700 152 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ANXA4P09525 319 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 RPL14P50914 215 aaKnown RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 GPR143P51810 404 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 PGDP52209 483 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 NR6A1Q15406 480 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ELAVL1Q15717 326 aaKnown RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 IRAK1BP1Q5VVH5 260 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 NOXRED1Q6NXP6 359 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 JMJD6Q6NYC1 403 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 SLC48A1Q6P1K1 146 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 DGAT2L6Q6ZPD8 337 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ASB18Q6ZVZ8 466 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 SIRT6Q8N6T7 355 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ELP5Q8TE02 316 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 FCRL1Q96LA6 429 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 EBPLQ9BY08 206 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 MANSC1Q9H8J5 431 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 HEY2Q9UBP5 337 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 G3BP2Q9UN86 482 aaKnown RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 PPIEQ9UNP9 301 aaKnown RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF451Q9Y4E5 1061 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 POLR3HQ9Y535 204 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-214ENST00000533209 PCDHGB7Q9Y5F8 929 aa11.2□□□□□ -0.62
SSBP3-214ENST00000533209 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 C1orf226A1L170 272 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 KLF11O14901 512 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 KLHL41O60662 606 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 JUNP05412 331 aaKnown RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 DRD2P14416 443 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ALOX15P16050 662 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 SOX11P35716 441 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 STT3AP46977 705 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 AP2B1P63010 937 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 OCRLQ01968 901 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF763Q0D2J5 394 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 BIKQ13323 160 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 RFTN2Q52LD8 501 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 AGAP7PQ5VUJ5 663 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 B3GNTL1Q67FW5 361 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 FAM71E1Q6IPT2 247 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 H3F3CQ6NXT2 135 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 TRIM42Q8IWZ5 723 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ST13P4Q8IZP2 240 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 TMEM132CQ8N3T6 1108 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 APCDD1LQ8NCL9 501 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 B3GNT7Q8NFL0 401 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 OR4K14Q8NGD5 310 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms