RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 NUDT4Q9NZJ9 180 aa16.79■□□□□ 0.28
SCN4B-205ENST00000531550 PRRC2AP48634 2157 aaKnown RBP16.78■□□□□ 0.28
SCN4B-205ENST00000531550 NAV3Q8IVL0 2385 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
SCN4B-205ENST00000531550 DLX3O60479 287 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 HIST1H2AGP0C0S8 130 aaPredicted RBP16.78■□□□□ 0.28
SCN4B-205ENST00000531550 DRD2P14416 443 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 ALOX12P18054 663 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 HIST1H2ADP20671 130 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 ALDH3A1P30838 453 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 AP1S2P56377 157 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 DNAJB13P59910 316 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 MBOAT1Q6ZNC8 495 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 MDGA2Q7Z553 956 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 NUDCD3Q8IVD9 361 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 TRIM42Q8IWZ5 723 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 OR5M3Q8NGP4 307 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 HIST1H2AHQ96KK5 128 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 HIST1H2AJQ99878 128 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 H2AFJQ9BTM1 129 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 DEFB127Q9H1M4 99 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 GSX1Q9H4S2 264 aaPredicted RBP16.78■□□□□ 0.28
SCN4B-205ENST00000531550 PDE10AQ9Y233 779 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 L3MBTL1Q9Y468 752 aa16.78■□□□□ 0.28
SCN4B-205ENST00000531550 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 TRBV11-1A0A0K0K1C0 115 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 A8MUA0 341 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 UBXN8O00124 270 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 TRIM13O60858 407 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 MAOAP21397 527 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 SKP1P63208 163 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 MEF2AQ02078 507 aaPredicted RBP16.77■□□□□ 0.28
SCN4B-205ENST00000531550 ASPHQ12797 758 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 FOXD4Q12950 439 aaPredicted RBP16.77■□□□□ 0.28
SCN4B-205ENST00000531550 PDK4Q16654 411 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 PHKG1Q16816 387 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 AGTRAPQ6RW13 159 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 LCTLQ6UWM7 567 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 FRA10AC1Q70Z53 315 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 TMEM156Q8N614 296 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 APCDD1LQ8NCL9 501 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 PDPRQ8NCN5 879 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 RAB3IL1Q8TBN0 382 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 DYDC1Q8WWB3 177 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 SREK1Q8WXA9 508 aaKnown RBP16.77■□□□□ 0.28
SCN4B-205ENST00000531550 SGPP1Q9BX95 441 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 ATG10Q9H0Y0 220 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 ST6GALNAC2Q9UJ37 374 aa16.77■□□□□ 0.28
SCN4B-205ENST00000531550 A8MT66 165 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 STX16O14662 325 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 SUPT3HO75486 399 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 ITGA10O75578 1167 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 CTAG2O75638 210 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 ZNF888P0CJ79 500 aaPredicted RBP16.76■□□□□ 0.27
SCN4B-205ENST00000531550 CCND1P24385 295 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 GYS2P54840 703 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
SCN4B-205ENST00000531550 NAE1Q13564 534 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 PWP1Q13610 501 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 CEBPEQ15744 281 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 LIPMQ5VYY2 423 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 SULT1C3Q6IMI6 304 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 NIPAL1Q6NVV3 410 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 PAOXQ6QHF9 649 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 TCAIMQ8N3R3 496 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 OR6Y1Q8NGX8 325 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 MAGEB18Q96M61 343 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 MECRQ9BV79 373 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 SARGQ9BW04 601 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 POLDIP3Q9BY77 421 aaKnown RBP16.76■□□□□ 0.27
SCN4B-205ENST00000531550 SLC6A16Q9GZN6 736 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 LIME1Q9H400 295 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 CCDC134Q9H6E4 229 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 NECTIN3Q9NQS3 549 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 PRDM9Q9NQV7 894 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 DLL4Q9NR61 685 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 DEPPQ9NTK1 212 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 CD274Q9NZQ7 290 aa16.76■□□□□ 0.27
SCN4B-205ENST00000531550 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
SCN4B-205ENST00000531550 ABCA2Q9BZC7 2435 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 WDR91A4D1P6 747 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 PABPN1LA6NDY0 278 aaKnown RBP16.75■□□□□ 0.27
SCN4B-205ENST00000531550 NPIPA2E9PIF3 369 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 NPIPA3F8WFD2 350 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 KLF11O14901 512 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 OR1F1O43749 312 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
SCN4B-205ENST00000531550 S100BP04271 92 aaPredicted RBP16.75■□□□□ 0.27
SCN4B-205ENST00000531550 SERPIND1P05546 499 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 GFAPP14136 432 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 IMPDH1P20839 514 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 HNMTP50135 292 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 CLCN2P51788 898 aa16.75■□□□□ 0.27
SCN4B-205ENST00000531550 DLX5P56178 289 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms