RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 FUOMA2VDF0 154 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 TRIM64BA6NI03 449 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 IDSB3KWA1 339 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 MSTNO14793 375 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FOXS1O43638 330 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 H6PDO95479 791 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 TSPAN12O95859 305 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 HPP00738 406 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ENO1P06733 434 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CYC1P08574 325 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 F7P08709 466 aaPredicted RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ANXA5P08758 320 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ENO2P09104 434 aaPredicted RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ICAM2P13598 275 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FBLP22087 321 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 IL10P22301 178 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FDXRP22570 491 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CXCR2P25025 360 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ITGA3P26006 1051 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 GRK3P35626 688 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 AVPR1BP47901 424 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 HNRNPFP52597 415 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 EMP2P54851 167 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CDKN2DP55273 166 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FOXL2P58012 376 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CSNK1G2P78368 415 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 DLG1Q12959 904 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 NAB1Q13506 487 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 HERC3Q15034 1050 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 RGS21Q2M5E4 152 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 HKDC1Q2TB90 917 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 SFT2D3Q587I9 215 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 VWA2Q5GFL6 755 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CRB2Q5IJ48 1285 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 RBM20Q5T481 1227 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 HECTD2Q5U5R9 776 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CAPN13Q6MZZ7 669 aaPredicted RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FAM45BPQ6NSW5 357 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 LCTLQ6UWM7 567 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 NDUFAF7Q7L592 441 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 GPR141Q7Z602 305 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ADCK2Q7Z695 626 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 SLC26A11Q86WA9 606 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 C17orf64Q86WR6 236 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 TREML1Q86YW5 311 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 TMEM151BQ8IW70 566 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 C4orf33Q8N1A6 199 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 GOLM1Q8NBJ4 401 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CAMKVQ8NCB2 501 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 ABHD11Q8NFV4 315 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 OR4K1Q8NGD4 311 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 FAM45AQ8TCE6 357 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 PPP4R1Q8TF05 950 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 SLC44A1Q8WWI5 657 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 MMABQ96EY8 250 aaPredicted RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 DOK1Q99704 481 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 BARD1Q99728 777 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 BCL7BQ9BQE9 202 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 PSD2Q9BQI7 771 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 SYNPO2LQ9H987 977 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 CLK4Q9HAZ1 481 aaKnown RBP7.58□□□□□ -1.2
SCN1A-207ENST00000507401 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 C14orf105Q9NVL8 296 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 NSMCE4AQ9NXX6 385 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 TRPC4Q9UBN4 977 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 C3orf18Q9UK00 162 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 GRID1Q9ULK0 1009 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 AP4B1Q9Y6B7 739 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 DOCK10Q96BY6 2186 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 PTPN13Q12923 2485 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 COL12A1Q99715 3063 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 LOC102723996A0A087X1L8 192 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 PABPN1LA6NDY0 278 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 CENPBD1B2RD01 187 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 HAT1O14929 419 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 BANF1O75531 89 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 NSA2O95478 260 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SERPINA7P05543 415 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ACPPP15309 386 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 CRHR1P34998 444 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 PRKAA2P54646 552 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 RPS3AP61247 264 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TBPL1P62380 186 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SRSF1Q07955 248 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 NAE1Q13564 534 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 RAPSNQ13702 412 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TUBA3CQ13748 450 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 CCNIQ14094 377 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ZXDCQ2QGD7 858 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 HP1BP3Q5SSJ5 553 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 B3GNTL1Q67FW5 361 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TRMT10BQ6PF06 316 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TMEM205Q6UW68 189 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ISLR2Q6UXK2 745 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TIFABQ6ZNK6 161 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 DCDC5Q6ZRR9 648 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SHISA6Q6ZSJ9 500 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 VN1R4Q7Z5H5 301 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms