RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PEA15Q15121 130 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GRIK5Q16478 980 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM41BQ5BJD5 291 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 XKR5Q6UX68 686 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GOLGA7Q7Z5G4 137 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PDSS2Q86YH6 399 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 EGFL6Q8IUX8 553 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 OR4D6Q8NGJ1 314 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PPTC7Q8NI37 304 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLC5A11Q8WWX8 675 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TLCD1Q96CP7 247 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SDSLQ96GA7 329 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SH3YL1Q96HL8 342 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF75AQ96N20 296 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 OR4K3Q96R72 315 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FN3KRPQ9HA64 309 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FBXW11Q9UKB1 542 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 STUB1Q9UNE7 303 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 F5H5P2 479 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 STK17BO94768 372 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 C8orf89P0DMQ9 161 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CSKP41240 450 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 MAGEB1P43366 347 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 GPR143P51810 404 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 EEF1A1P68104 462 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PTPRRQ15256 657 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 RABL3Q5HYI8 236 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 EEF1A1P5Q5VTE0 462 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 SLC22A10Q63ZE4 541 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 AWAT2Q6E213 333 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 SLC27A4Q6P1M0 643 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ADGRA1Q86SQ6 560 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DNAJC22Q8N4W6 341 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF610Q8N9Z0 462 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF439Q8NDP4 499 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 OR6C4Q8NGE1 309 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DDX1Q92499 740 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PYCR2Q96C36 320 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 MKS1Q9NXB0 559 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 RHCGQ9UBD6 479 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 D6RAR5 112 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 APOA2P02652 100 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF43P17038 809 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 HOXA9P31269 272 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CLCNKAP51800 687 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DGKQP52824 942 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DEFA6Q01524 100 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DLX2Q07687 328 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ANKRD54Q6NXT1 300 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 FAM122CQ6P4D5 195 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PIGWQ7Z7B1 504 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DEDD2Q8WXF8 326 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 SGCZQ96LD1 299 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF599Q96NL3 588 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CNN2Q99439 309 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 KCNH6Q9H252 994 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF286AQ9HBT8 521 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 KLHL9Q9P2J3 617 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 KIF25Q9UIL4 384 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 TRBV2A0A0J9YWF9 115 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 A0A1W2PPW3 197 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 NEMP2A6NFY4 417 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 AOC2O75106 756 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 VSX2P58304 361 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CSNK2A1P68400 391 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 KCNC4Q03721 635 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 ARSIQ5FYB1 569 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 LRRC73Q5JTD7 316 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 IDO2Q6ZQW0 420 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 FBXL16Q8N461 479 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CSNK2A3Q8NEV1 391 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 HMGB4Q8WW32 186 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 TAAR8Q969N4 342 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DNAJC19Q96DA6 116 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 NELL2Q99435 816 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 STRADBQ9C0K7 418 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PAK1IP1Q9NWT1 392 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 SLC22A14Q9Y267 594 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 MTMR11A4FU01 709 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 A8MT66 165 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 H0YAE9 185 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DIRAS1O95057 198 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 C6P13671 934 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 NAA10P41227 235 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 RPL23AP62750 156 aaKnown RBP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 VGLL4Q14135 290 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 FUT10Q6P4F1 479 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 LRFN4Q6PJG9 635 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM151AQ8N4L1 468 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-221ENST00000493795 DPF1Q92782 380 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 OR1F2PQ96R84 312 aa7.56□□□□□ -1.2
BRCA1-221ENST00000493795 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms