RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 HPS4Q9NQG7 708 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 PRODH2Q9UF12 536 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 EXOC6BQ9Y2D4 811 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 PCDHGA1Q9Y5H4 931 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 FAM169AQ9Y6X4 670 aa1.67□□□□□ -2.14
HPS3-205ENST00000478525 C2orf92A0A1B0GVN3 265 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 LRCOL1A6NCL2 159 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 SLC15A5A6NIM6 579 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 CD5P06127 495 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 SP9P0CG40 484 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 PSMB1P20618 241 aaKnown RBP1.66□□□□□ -2.14
HPS3-205ENST00000478525 ACKR3P25106 362 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 RPA1P27694 616 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 ACTN2P35609 894 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 PMELP40967 661 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 RPP38P78345 283 aaKnown RBP1.66□□□□□ -2.14
HPS3-205ENST00000478525 CD47Q08722 323 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 CEACAM7Q14002 265 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 CCDC14Q49A88 953 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 WDR78Q5VTH9 848 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 PLPPR4Q7Z2D5 763 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 TDHQ8IZJ6 230 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 POGLUT1Q8NBL1 392 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 AK8Q96MA6 479 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 CCM2Q9BSQ5 444 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 KATNB1Q9BVA0 655 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 DPEP3Q9H4B8 488 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 ZNF702PQ9H963 129 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 IL1RL2Q9HB29 575 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 APOBEC3BQ9UH17 382 aaKnown RBP1.66□□□□□ -2.14
HPS3-205ENST00000478525 NOCTQ9UK39 431 aaKnown RBP1.66□□□□□ -2.14
HPS3-205ENST00000478525 CCPG1Q9ULG6 757 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 GPR34Q9UPC5 381 aa1.66□□□□□ -2.14
HPS3-205ENST00000478525 A0A0U1RQK1 487 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 SERF1AO75920 110 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 SPP1P10451 314 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 KRT3P12035 628 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 NNMTP40261 264 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 CRKLP46109 303 aaKnown RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 GMPSP49915 693 aaPredicted RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 ARHGDIAP52565 204 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 ZNF131P52739 623 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 HERPUD1Q15011 391 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 PRR4Q16378 134 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 KCTD19Q17RG1 926 aaPredicted RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 CRY2Q49AN0 593 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 NHSL2Q5HYW2 709 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 C9orf152Q5JTZ5 239 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 FAM219BQ5XKK7 198 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 PI4KAP1Q8N8J0 262 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 NCOA7Q8NI08 942 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 CRYGNQ8WXF5 182 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 ZNF274Q96GC6 653 aaPredicted RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 JPH2Q9BR39 696 aaPredicted RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 ELL3Q9HB65 397 aaPredicted RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 RPS6KA6Q9UK32 745 aa1.65□□□□□ -2.15
HPS3-205ENST00000478525 FBN1P35555 2871 aaKnown RBP1.65□□□□□ -2.15
HPS3-205ENST00000478525 IGLV8-61A0A075B6I0 122 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 MFSD2BA6NFX1 497 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 FLRT2O43155 660 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 MOCS2O96007 188 aaPredicted RBP1.64□□□□□ -2.15
HPS3-205ENST00000478525 CCNE1P24864 410 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 HSPA4P34932 840 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 DIO3P55073 304 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 EMC2Q15006 297 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 SLC22A10Q63ZE4 541 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 ITPRIPL1Q6GPH6 555 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 GPR65Q8IYL9 337 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 TMEM99Q8N816 258 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 EVI5LQ96CN4 794 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 RAB3CQ96E17 227 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 UBA5Q9GZZ9 404 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 ZHX3Q9H4I2 956 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 MIEF1Q9NQG6 463 aa1.64□□□□□ -2.15
HPS3-205ENST00000478525 SNAI2O43623 268 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 NUDT21O43809 227 aaKnown RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 ACSL4O60488 711 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 ZNF324O75467 553 aaPredicted RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 CLNS1AP54105 237 aaKnown RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 MFAP2P55001 183 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 PFN3P60673 137 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 RPL27P61353 136 aaKnown RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 EIF4EBP1Q13541 118 aaPredicted RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 ACER2Q5QJU3 275 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 SYVN1Q86TM6 617 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 EXOC8Q8IYI6 725 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 POMGNT2Q8NAT1 580 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 RMDN2Q96LZ7 410 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 PLEKHF1Q96S99 279 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 PRMT1Q99873 361 aaKnown RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 ST6GALNAC5Q9BVH7 336 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 C19orf24Q9BVV8 132 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 VIPAS39Q9H9C1 493 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 ZNF282Q9UDV7 671 aaPredicted RBP1.63□□□□□ -2.15
HPS3-205ENST00000478525 ARHGAP21Q5T5U3 1957 aa1.63□□□□□ -2.15
HPS3-205ENST00000478525 COL1A2P08123 1366 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 DIAPH2O60879 1101 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms